Gene Information

Name : fliP (HM1_2239)
Accession : YP_001680806.1
Strain : Heliobacterium modesticaldum Ice1
Genome accession: NC_010337
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein flip
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2232858 - 2233589 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence : 
TTGGTTTTATTATTGGCAATCTTTTACTGGGTGACGCCTGCGCTGGCTGCGCCTTTGCAGATACCGACAGTCAGCTTCGG
TGTCGAATCGACGGAAAATCCGACAGAGGTTTCGACAAGCCTGCAGATCCTCTTCCTATTGACCATTCTGTCGCTGGCGC
CGTCGATCCTGATCATGATGACCTGTTTCACCCGTATCATCGTCGTCCTCCACTTTACCCGAACAGCCCTTGCCTTGCAG
ACGATGCCGCCGAACCAGGTGCTGATCGGTTTGACCTTATTCTTAACTTTTTTTATCATGGCGCCCACCTGGTCAGCCAT
CAATGATCAAGCCTTACAGCCTTACCTAGCCGGCACTCTCTCGCAGGAGCAGGCGCTGGAAAAGGCGTCCACTCCCTTGC
GGGAGTTTATGTTGAAGCAGACCCGGGAAAAAGATCTGGCCTTGTTCGTCAATATGTCAGACATGGAACAGCCGCAAACG
TACCGGGACATCCCTATCAAGGTTGTGATTCCGGCATTCATTCTGAGTGAATTGAAGACAGCCTTTCAGATCGGGGCCGT
CATCTACCTGCCCTTTATTGTCATTGATATGATTGTCGGATCTGTGCTTATGTCGATGGGGATGATGATGTTGCCGCCGA
TGATGATCTCCCTGCCCTTTAAGGTGCTCGTTTTTGTGCTTGTGGATGGATGGTACCTCATCGTCCGCTCCTTGATCCTC
AGCTACCAATGA

Protein sequence : 
MVLLLAIFYWVTPALAAPLQIPTVSFGVESTENPTEVSTSLQILFLLTILSLAPSILIMMTCFTRIIVVLHFTRTALALQ
TMPPNQVLIGLTLFLTFFIMAPTWSAINDQALQPYLAGTLSQEQALEKASTPLREFMLKQTREKDLALFVNMSDMEQPQT
YRDIPIKVVIPAFILSELKTAFQIGAVIYLPFIVIDMIVGSVLMSMGMMMLPPMMISLPFKVLVFVLVDGWYLIVRSLIL
SYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-16 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-16 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-16 43
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 7e-16 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001680806.1 flagellar biosynthetic protein flip VFG1259 Protein 3e-36 56
fliP YP_001680806.1 flagellar biosynthetic protein flip VFG2016 Protein 2e-33 53
fliP YP_001680806.1 flagellar biosynthetic protein flip VFG2494 Protein 5e-34 53
fliP YP_001680806.1 flagellar biosynthetic protein flip VFG2338 Protein 2e-32 52