Gene Information

Name : ribD (HM1_2141)
Accession : YP_001680708.1
Strain : Heliobacterium modesticaldum Ice1
Genome accession: NC_010337
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein ribd
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2146657 - 2147781 bp
Length : 1125 bp
Strand : +
Note : -

DNA sequence :
TTGATTCCGGAAGACTTTTCATTCATGGACCGCGCCCTGGAACTTGCCGCCCTAGCCTTAGGCCGGACAAGCCCCAACCC
GGTCGTCGGCGCGGTTGTTGTCAAGGATGGCCGCGTCATCGGGGAAGGGTATCATCGGAAAGCGGGGACGCCTCATGCGG
AGGTTCACGCCTTGCGCCAGGCCGGTGAGGCCGCCTGCGGCGGGACCCTCTATGTGACCCTTGAACCGTGCAACCATCAT
GGACGGACACCGCCCTGCACTGAAGCGATCATCGCCGCCAAGATCAGCCGGGTGGTGGCCGCCGTGGCGGATCCCAACCC
CCAGGTGGCGGGGCAGGGATTTGCCAGGCTGCGAGAGGCCGGCATCGAAGTCGATGTGGGGGTGATGGCCGATGCGGCCA
TCACCATCAATCAGCCCTTTTTCACTTGGGTGACGCGCAAGCGGCCTTGGGTGTTGCTCAAATGGGCCATGACGGCAGAC
GGCAAGATCGCCACCGCATCAGGTGACAGCCGCTGGGTCAGCAGTCCGGCGTCGCGGCGCAAGGTCCACCAGTGGCGCAA
TCGCCTTGACGCCATCCTGGTCGGCATCGGCACGGTGCTGGCCGATGATCCCCAGTTGACTGTCCGCCTCGCCGAAAAGG
ATTGTCGCAACCCTATCCGTATCATCGTCGACAGCAAGGCGCGGACACCGCTGACGGCGAAGGTCCTGTCGGCGGAGGCG
AAGACCATCATCGCTGTCACCGAGGCGGCGCCGGCGGAGCAGGTGGCAGCGCTCGAACAGGCCGGGGCCACCGTCCTGCG
CTGCCCAGCCGATGCCGGCGGATGCGTCGACCTGTCCTATCTGTTGCACCGACTCGCCTGTGACAACGTCACGTCGCTTT
TGGTGGAGGGCGGGGCGCGCATCCATGGCGCCTTTTTAGATGGAAACCTGGCCGACCGGGCGGCCATCTTCCTGGCCCCG
AAGATCGTCGGCGGAGAAGGGGCGCCGTCGCCGGTCGGCGGGACCGGAGCGGCCCTGATGGCCAAGGCCCGCCGGCTGCA
AAGATGTGTGATGACCTCTGTCGGAGACGATTGGCTGCTCGAAGGGGTGCTGCAGGAGGTGAGGCCGTGTTTACCGGAAT
CGTAG

Protein sequence :
MIPEDFSFMDRALELAALALGRTSPNPVVGAVVVKDGRVIGEGYHRKAGTPHAEVHALRQAGEAACGGTLYVTLEPCNHH
GRTPPCTEAIIAAKISRVVAAVADPNPQVAGQGFARLREAGIEVDVGVMADAAITINQPFFTWVTRKRPWVLLKWAMTAD
GKIATASGDSRWVSSPASRRKVHQWRNRLDAILVGIGTVLADDPQLTVRLAEKDCRNPIRIIVDSKARTPLTAKVLSAEA
KTIIAVTEAAPAEQVAALEQAGATVLRCPADAGGCVDLSYLLHRLACDNVTSLLVEGGARIHGAFLDGNLADRAAIFLAP
KIVGGEGAPSPVGGTGAALMAKARRLQRCVMTSVGDDWLLEGVLQEVRPCLPES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-43 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-43 44