Gene Information

Name : metB (HM1_1730)
Accession : YP_001680311.1
Strain : Heliobacterium modesticaldum Ice1
Genome accession: NC_010337
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1734872 - 1736005 bp
Length : 1134 bp
Strand : +
Note : -

DNA sequence :
ATGCACATCGATTCACTGTTGGCCCAGGGGGGCAACGGCAAAGACGCGGGCACAGGCGCCGTCAGTTTTCCTATCTACCA
GTCGGCCACCTTCCGTCACCCGGCTTTGGGAGAAAGCACCGGATTTGATTACAGCCGATCGGGGAACCCCACCCGCCAGG
TGCTGGAAGAACTGATCGCCAAACTGGAGGGCGGGCGACGCGGGCTGGCCTTCTCTTCCGGATTGGCGGCTATTACAGCG
GTCATCTCACTCTTCGGTCCTGGCGATCACTTGATCCTCTGCGAAGACCTCTATGGGGGGACATACCGGCTGCTGGAACA
GGTCTTTCGTCCCTGGGGGCTGACGGCGGATTATGTAAATACGAGCGACCCAGAACAGGTAAATGCCGCCGTCACCTCCC
GGACGAAGGCCATCTTTATCGAGACGCCCACCAACCCAACGATGAAGATCACAGACCTACGCGAAATCCGGCGGATCTGT
GACGACGGGGGCCTCCTGCTGATCGTTGACAACACCTTCATAAGTCCTTATCTGCAACGTCCCATCGAATGTGGCGCCGA
TATCGTCATCCACAGCGGCACCAAATACCTGGGCGGTCACAACGATGTGGTGGCTGGGCTGGCCGTTGCCGCCCGGGAGG
ACCTCGGCGACAAGCTGGCCTTCTATCAAAACGCCTCCGGCGCCGTCCTCGGCCCTTTTGATTCGTGGCTGCTCGTGCGC
GGTATGAAGACCTTGGGGCTGCGCCTGGATCGGGCGCAGGAGAACGCGAGCGCTATCGCCCGTTGGTTGGCGTCACACCC
CGCTGTCGATCAGGTTTACTATATCGGCCTCGATAACCACCCAGGCAGGGAGGTTCATTTTCAGCAGGCCAGCGGGCCCG
GGGGCATGATCTCTTTTACCCTGCATGACGCCGGAAAAGTCCCGGAGGTGTTGTCACGGATTCAATTGATCTCTTTTGCC
GAAAGCCTGGGGGGCGTCGAGTCGCTGCTCACCTTTCCGGCCCGCCAGACCCACGGCGATATCCCCGAGGACATCCGCCG
GCGCTGCGGCGTCACCGACTGTCTGCTCCGGTTGTCCGTCGGGATCGAAAACGTCCACGATTTGATCGACGATTTGGCCC
AGGCCTTGGCCTAA

Protein sequence :
MHIDSLLAQGGNGKDAGTGAVSFPIYQSATFRHPALGESTGFDYSRSGNPTRQVLEELIAKLEGGRRGLAFSSGLAAITA
VISLFGPGDHLILCEDLYGGTYRLLEQVFRPWGLTADYVNTSDPEQVNAAVTSRTKAIFIETPTNPTMKITDLREIRRIC
DDGGLLLIVDNTFISPYLQRPIECGADIVIHSGTKYLGGHNDVVAGLAVAAREDLGDKLAFYQNASGAVLGPFDSWLLVR
GMKTLGLRLDRAQENASAIARWLASHPAVDQVYYIGLDNHPGREVHFQQASGPGGMISFTLHDAGKVPEVLSRIQLISFA
ESLGGVESLLTFPARQTHGDIPEDIRRRCGVTDCLLRLSVGIENVHDLIDDLAQALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-90 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-91 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-63 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_001680311.1 cystathionine gamma-synthase BAC0207 Protein 3e-59 42