Gene Information

Name : HM1_1644 (HM1_1644)
Accession : YP_001680225.1
Strain : Heliobacterium modesticaldum Ice1
Genome accession: NC_010337
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1659651 - 1660355 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAAAAATTCTAATCGTCGAAGACGAAATCGATGTAGCCAAACTGGTGGCCGATCAGCTAAAAAGCGAAGGTTTTCA
GGTTCTGATGGCTCATGATGGAAAGAGCGCCATCGATTCCATCGATGTGGAAGAATTTAATTTATTTATTTTGGATATCA
TGCTTCCGGACATGGATGGCAGTGAGGTATTGCAATATATTCGTCGGAAAACATCCAAACCCGTGATCATGTTAACGGCA
AAAGATAATGACATGGATAAAGTTGTCAACTTTACTCTCGGAGCCGATGACTACATTGTGAAGCCCTTCAGCCTAATCGA
ATTGACGGCTCGGGTAAAGGCGGTTTTGCGACGAACAGAGGGAACCCATCATATCACCGAAAATCAAGTGGGAAAGGAAA
CCATTCTTCACTGTGGGTCCTTGGAAATCAATTGTGATACCACTGAAGTAAAAGTAAAGGGCAACGTGATCTCATTAAAA
GCCAAAGAATTCACTCTATTGAAATATTTGGCTGAGCGACCGAATCGAGTGGTAACGATCGCGCAGATTTATGAAAGTGT
GTGGGGAAAAGAGTTTATCCATGATGACAATACCGTCATGGTTCACATCTCCCGATTGAGAAATAAAATCGAAGAGGATC
CCGCTAACCCGCAGCGATTGCAAACCGTTCGCGGATTAGGGTATCGATTGGTATGTGGGAAATGA

Protein sequence : 
MRKILIVEDEIDVAKLVADQLKSEGFQVLMAHDGKSAIDSIDVEEFNLFILDIMLPDMDGSEVLQYIRRKTSKPVIMLTA
KDNDMDKVVNFTLGADDYIVKPFSLIELTARVKAVLRRTEGTHHITENQVGKETILHCGSLEINCDTTEVKVKGNVISLK
AKEFTLLKYLAERPNRVVTIAQIYESVWGKEFIHDDNTVMVHISRLRNKIEEDPANPQRLQTVRGLGYRLVCGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HM1_1644 YP_001680225.1 transcriptional regulator AF155139.2.orf0.gene Protein 2e-42 44
HM1_1644 YP_001680225.1 transcriptional regulator AM180355.1.gene1830. Protein 2e-41 44
HM1_1644 YP_001680225.1 transcriptional regulator FJ349556.1.orf0.gene Protein 2e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_014475.1.orf0.gen Protein 5e-38 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_005054.2598277.p0 Protein 5e-38 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_002952.2859905.p0 Protein 1e-41 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_013450.8614421.p0 Protein 9e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator AF130997.1.orf0.gene Protein 1e-37 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_007793.3914279.p0 Protein 9e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_002745.1124361.p0 Protein 9e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_009782.5559369.p0 Protein 9e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_002951.3237708.p0 Protein 9e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_007622.3794472.p0 Protein 1e-41 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_003923.1003749.p0 Protein 7e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_002758.1121668.p0 Protein 9e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator NC_009641.5332272.p0 Protein 9e-42 43
HM1_1644 YP_001680225.1 transcriptional regulator EU250284.1.orf4.gene Protein 1e-41 43
HM1_1644 YP_001680225.1 transcriptional regulator AF162694.1.orf4.gene Protein 1e-41 43
HM1_1644 YP_001680225.1 transcriptional regulator AE015929.1.gene1106. Protein 2e-28 42
HM1_1644 YP_001680225.1 transcriptional regulator DQ212986.1.gene4.p01 Protein 8e-41 42
HM1_1644 YP_001680225.1 transcriptional regulator NC_012469.1.7685629. Protein 7e-43 42
HM1_1644 YP_001680225.1 transcriptional regulator BAC0197 Protein 9e-37 41
HM1_1644 YP_001680225.1 transcriptional regulator NC_012469.1.7686381. Protein 4e-42 41
HM1_1644 YP_001680225.1 transcriptional regulator AE016830.1.gene1681. Protein 4e-41 41
HM1_1644 YP_001680225.1 transcriptional regulator HE999704.1.gene2815. Protein 3e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HM1_1644 YP_001680225.1 transcriptional regulator VFG0596 Protein 2e-32 42