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Name : clpC (HM1_1344) Accession : YP_001679932.1 Strain : Heliobacterium modesticaldum Ice1 Genome accession: NC_010337 Putative virulence/resistance : Virulence Product : clpc ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1368412 - 1370856 bp Length : 2445 bp Strand : + Note : Member of ATPase family associated with various cellular activities (AAA) PFAM, PF07724 DNA sequence : ATGATGGGACGTTTTACGGAGCGAGCGCAAAAGGTACTCCTCTTGGCGAAAGAGGAAGCGGTGGCCCTCAAACACCCCGC CGTCGGATCGGAACACCTGCTGCTAGGATTGATCCGGGAGGGTGAGGGCATCGGAGCGAAGGCTTTGCTCAGCATGCACC TTGACCTGGAACAGGTCCGTCGACAGGTGATCCGGCTTGTCGGCGAAGGCGCCAGTGAGCCTTCTGAGATCGGATTGACG CCGCGGGCGAAGCGTGCCCTCGAGCTGGCTAACGAAGAAGGACGGCGCCAGGGTGTCAACTACGTGGGCACGGAACACAT CCTGCTTGGCCTCATCCGTGAAGGCGAAGGTGTCGCCGCCCGCGTCCTGGCTGAACTGGGCCTCACTTTGGAAAAGGTGC GCCATCAGGTGATGACCCTGCTCGGCGGACCCCAGCCGACTCCTAGCGGAAATGGCAGCAGCGCCGCTGCAGAACGAGGC CGCAAGACGCCCGCCTTGAATGAGTTCGGCCGCGATCTGACCCAGTTGGCCCGCGACGGCAAACTCGATCCGGTCATCGG CCGGGAGAGAGAGATCGAGCGGGTCGTCCAGATCCTCTCCCGCCGCACGAAAAACAACCCCGTCCTTATCGGCGAACCTG GCGTCGGCAAGACGGCCGTCGCCGAGGGGCTGGCCCAGCGCATCGTCGATGGAAAGGTGCCCGAGACCTTGACCGGCAAG CGGGTCGTCACCTTGGACCTCTCCTCGGTCGTCGCCGGCTCCAAATACCGCGGCGAATTTGAAGAGCGGCTGAAAAAAGT GATGGACGAGATCCGCCAGGCCGGCAACGTCGTTCTCTTCATCGATGAATTGCACACCCTGATCGGCGCCGGTGCGGCGG AAGGCGCCATCGACGCTGCCAACATCCTCAAGCCGGCCTTGGCCCGGGGAGAACTACAGTGCATCGGCGCCACCACGCTG GATGAGTATCGAAAGCACATCGAGCGCGATCCTGCCCTGGAGCGGCGTTTCCAGCCGATCACCGTCGGCGAGCCGAAGCG GGAAGAGGCCGTCGCCATCCTCAAGGGACTTCGCGACCGCTATGAGGCCCACCACCGAGTGCAGATCACCGATGAAGCCA TCGAAGCGGCTGTCCGCCTCTCTGATCGGTATATTTCCGACCGCTACCTTCCCGACAAGGCCATCGACCTGATCGATGAG GCCGCCTCCCGCGTCCGGTTGCAAACCTTCACGGCGCCACCCGATATGAAGGAACTGGAGTCCCGCTTGGAGGGTTTGCG CAAGGAGAAGGAAGCCGCCGTCCTTTCCCAGGAGTTTGAAAAAGCCGCCCAGTTACGTGATCAGGAGATGCAGTTGCGCG CCCAACTGGAAAAGCAGAAGTCTGACTGGGAGCATGCCCGGGGCAGCGCCAATACGGTCGTCCGTGAAGAAGATATCGCC CAGATCGTCTCCAGTTGGACCGGTGTTCCAGTCACCCGGCTCGCCGAAAGCGAAAGCGCGCGCCTGCTGAAGCTTGAAGA GGAGCTGCACCGCCGCGTTATCGGCCAGGACGAAGCTGTCGCTGCTGTCTCCCGGGCTGTCCGTCGCGCCCGGGCCGGCC TTAAAGATCCTAAGCGCCCCATCGGTTCCTTCATCTTCCTCGGACCCACTGGCGTCGGCAAGACGGAACTGGCCCGCGCC CTGGCCGAAGCCCTTTTCGGGCAGGAAGATGCCATGGTTCGTATCGACATGTCCGAGTACATGGAAAAACATTCCGTGTC GCGGCTCGTCGGCGCGCCCCCCGGCTACATCGGCCATGACGAGGGCGGCCAGTTGACCGAGGCTGTCCGTCGCCGCCCCT ACTCTGTCATCCTCCTCGACGAGATTGAAAAGGCCAACCCCGAGGTTTTCAACATCCTTCTGCAGGTGCTCGAAGACGGG CGGCTCACCGACAGCAAGGGGCGGACCGTCGACTTTCGCAACACGGTAATCATCATGACTTCCAACGTGGGCGCCCAGAC GATCAAGCGCTCCGCTGTCATGGGCTTCAAACCGACGGAGCAGGGCGCCAAGGAGCGGGAAGTCCAGTATGAGGGTATGA AAAACCGGGTCATGGAGGAATTGAAGCGCAGCTTCCGGCCTGAATTCCTCAACCGCATCGACGAGATGATCGTCTTCCAT ACGCTGGCCGCCGAAGACATCCGCCGGATCGTCGACCTGATGCTCGGCGAGGTGAACCGCCGCTTGGCCGAAGCGGGGCT CTCCATGGAGGTCACCGATGCCGCCCGGGACCACCTGGCCAAGGTCGGCTATGATGAGACCTTCGGTGCCCGTCCCTTGC GCCGGGCGATCCTGCGGCTCGTGGAAGATGAGATCTCTGAGGCGCTCCTGAAGGGCGAATACAAAGCCGGCGATCAGATC ATCGTCGGTATGGCCGATGGAAAACTAAGCTTTGAGAAAAAGTAG Protein sequence : MMGRFTERAQKVLLLAKEEAVALKHPAVGSEHLLLGLIREGEGIGAKALLSMHLDLEQVRRQVIRLVGEGASEPSEIGLT PRAKRALELANEEGRRQGVNYVGTEHILLGLIREGEGVAARVLAELGLTLEKVRHQVMTLLGGPQPTPSGNGSSAAAERG RKTPALNEFGRDLTQLARDGKLDPVIGREREIERVVQILSRRTKNNPVLIGEPGVGKTAVAEGLAQRIVDGKVPETLTGK RVVTLDLSSVVAGSKYRGEFEERLKKVMDEIRQAGNVVLFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL DEYRKHIERDPALERRFQPITVGEPKREEAVAILKGLRDRYEAHHRVQITDEAIEAAVRLSDRYISDRYLPDKAIDLIDE AASRVRLQTFTAPPDMKELESRLEGLRKEKEAAVLSQEFEKAAQLRDQEMQLRAQLEKQKSDWEHARGSANTVVREEDIA QIVSSWTGVPVTRLAESESARLLKLEEELHRRVIGQDEAVAAVSRAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARA LAEALFGQEDAMVRIDMSEYMEKHSVSRLVGAPPGYIGHDEGGQLTEAVRRRPYSVILLDEIEKANPEVFNILLQVLEDG RLTDSKGRTVDFRNTVIIMTSNVGAQTIKRSAVMGFKPTEQGAKEREVQYEGMKNRVMEELKRSFRPEFLNRIDEMIVFH TLAAEDIRRIVDLMLGEVNRRLAEAGLSMEVTDAARDHLAKVGYDETFGARPLRRAILRLVEDEISEALLKGEYKAGDQI IVGMADGKLSFEKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-92 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001679932.1 | clpc ATPase | VFG0079 | Protein | 0.0 | 65 |
| clpC | YP_001679932.1 | clpc ATPase | VFG0080 | Protein | 5e-151 | 53 |
| clpC | YP_001679932.1 | clpc ATPase | VFG2084 | Protein | 2e-92 | 42 |
