Gene Information

Name : HM1_0855 (HM1_0855)
Accession : YP_001679717.1
Strain : Heliobacterium modesticaldum Ice1
Genome accession: NC_010337
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1144159 - 1145046 bp
Length : 888 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACGACAGAAACAGGAACCTGGACAGTGAAAAAAGGCCTGGCCGAGATGCTCAAGGGCGGCGTGATCATGGATGTCAC
CACGCCGGAGCAGGCCAAGATCGCCGAGGAAGCCGGCGCCTGCGCCGTCATGGCGCTGGAGCGCGTGCCGGCTGATATCC
GCGCCGCTGGCGGGGTGGCCCGCATGGCTGACCCGACGGTGATCCTGCGGATCATGGACGCTGTCACCATCCCGGTCATG
GCCAAAGCCCGCATCGGCCACTTTGTCGAGGCTCAGGTGCTGGAGTCGCTGGGCATCGACTACATCGATGAGTCGGAAGT
GCTGACGCCGGCCGATGATCTGTTTCATATCAACAAAAACGACTTCAAGGTGCCCTTCGTCTGTGGCGCCCGCAACCTGG
GAGAGGCACTGCGGCGCATCGGCGAAGGCGCGGCCATGATCCGGACGAAAGGCGAGCCCGGCACCGGCAACGTGGTGGAA
GCCGTGCGTCATGCCCGTCAGGTCATGAGCGAGATCCGCAAACTGACGACCCTGCCCAAGGAAGAGCGCATGTCCTTCGC
CAAGGAGATCGGCGCCCCCTACGAACTCGTCTGCTTGGTGGCCGAGACAGGCCGCCTGCCCGTGGTCAACTTTGCCGCCG
GCGGCATCGCCACCCCGGCTGACGCCGCCTTGATGATGCAGCTGGGCGTCGATGGCGTCTTCGTCGGCTCAGGCATCTTC
AAATCGGGCGACCCTATCCGCCGGGCCAAGGCCATCGTGGCCGCCACGACCCATTACAACGACCCGAAGGTCATCGCCGA
GGTGTCCAAAGACCTGGGCGAGCCGATGGTGGGCATCGAGATCCCGACCATCCCGGCGGAACAGCGCATGCAAGAGCGCG
GTTGGTAG

Protein sequence :
MTTETGTWTVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPTVILRIMDAVTIPVM
AKARIGHFVEAQVLESLGIDYIDESEVLTPADDLFHINKNDFKVPFVCGARNLGEALRRIGEGAAMIRTKGEPGTGNVVE
AVRHARQVMSEIRKLTTLPKEERMSFAKEIGAPYELVCLVAETGRLPVVNFAAGGIATPADAALMMQLGVDGVFVGSGIF
KSGDPIRRAKAIVAATTHYNDPKVIAEVSKDLGEPMVGIEIPTIPAEQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-88 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-88 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-88 70