Gene Information

Name : Fphi_1159 (Fphi_1159)
Accession : YP_001677884.1
Strain : Francisella philomiragia ATCC 25017
Genome accession: NC_010336
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export transport system ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1258316 - 1258969 bp
Length : 654 bp
Strand : -
Note : KEGG: cju:C8J_1353 capsule polysaccharide export transport system ATP-binding protein

DNA sequence :
ATGATACAACTTGTAAATGCTACCAAATTTTATAATATCCGCGGTTATAAACACTATATCCTCAAGGATGTAAGTTATAC
TTTCCCTAAAGGTAAAAGCATAGGTATACTTGGCCGTAATGGAGCTGGTAAGTCAACATTTTTGCGTATGCTTGGTGGTC
TTGAATACCCGAACTCTGGTAAGATAATTACAACTAGCTCTATATCATGGCCTGTAGGGCTGATAGCAGGTTTTCAAGGT
AGTCTAACAGCACGCGAAAACATCAAATTTGTCTGTCGCATCCACAACAAAAGTCGACGCGAAATGAAACAAATAGAAGA
ATATGTCTATGACTTTGCGGAGATTGGTGAGTTTTTTGATATGCCTGTCAAATCATATAGCTCAGGCATGAGAGCTAGGA
TCAACTTCGGATTATCAATGGCTTTTGACTTTGACTACTACCTGATCGATGAAGTTTCTGGAGTCGGAGATCCTCAATTC
GGTAAAAAATCAAAAGCTATTTTTGAGGAAAAGAAAAAAAAAGCATGTGTCATAGTAGTCTCTCACAACATGAAGGAAAT
CAAAACTCATTGTGATATCGCAGTTGTGCTAGAGAATGGTAAAATAAACATATTTGATGATATGGATAAGGCTATAGCCT
TATATCAGAAATAA

Protein sequence :
MIQLVNATKFYNIRGYKHYILKDVSYTFPKGKSIGILGRNGAGKSTFLRMLGGLEYPNSGKIITTSSISWPVGLIAGFQG
SLTARENIKFVCRIHNKSRREMKQIEEYVYDFAEIGEFFDMPVKSYSSGMRARINFGLSMAFDFDYYLIDEVSGVGDPQF
GKKSKAIFEEKKKKACVIVVSHNMKEIKTHCDIAVVLENGKINIFDDMDKAIALYQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-49 52
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-48 51
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-39 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fphi_1159 YP_001677884.1 capsule polysaccharide export transport system ATP-binding protein VFG1449 Protein 1e-48 51
Fphi_1159 YP_001677884.1 capsule polysaccharide export transport system ATP-binding protein VFG0258 Protein 9e-40 47
Fphi_1159 YP_001677884.1 capsule polysaccharide export transport system ATP-binding protein VFG0696 Protein 3e-40 46
Fphi_1159 YP_001677884.1 capsule polysaccharide export transport system ATP-binding protein VFG2563 Protein 1e-35 41