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Name : Shal_0844 (Shal_0844) Accession : YP_001673078.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1049126 - 1051117 bp Length : 1992 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTCATCTCGTAAAGAACTCGCAAACGCAATCCGCGCATTGACCATGGATGCTGTTCAAAAAGCCAATTCAGGTCACCC AGGTGCACCTATGGGGATGGCTGATATTGCTGAAGTGCTCTGGAACGATTTCCTAAAGCACAACCCAAACAACCCTGACT GGGTTGATCGTGACCGCTTTATCCTTTCTAACGGCCACGGCTCTATGCTTATCTACTCTTTGCTGCACCTAACAGGTTAC GCATTACCTATCGAAGAGTTAAAAAACTTCCGCCAGCTTCACTCTAAAACACCTGGTCACCCAGAATACGGTTACACACC AGGTGTTGAAACGACAACAGGTCCGTTAGGTGCTGGTATCAGTAACGCTGTTGGTATGGCGATTGCTGAAAAGACATTGG CTGCACAGTTTAACAAGCCAGGTCACGATATTGTTGATCACTTCACATACTGCTTCCTAGGCGATGGCTGTTTGATGGAA GGTATCTCTCACGAAGCCTGTTCTCTAGCGGGTACCCTAGGTCTGGGTAAGCTAGTTGCGTTCTGGGATGACAACGGTAT CTCTATCGACGGTCACGTTGAAGGTTGGTTCACTGACGATACGCCTAAGCGTTTTGAATCTTACGGCTGGCATGTTATCG CTAACGTAGATGGTCACGACAGCGACGCTATTCGTGCGGCAATCGAAGCAGCTAAGTCTGTTACAGATAAGCCTACAATG ATCTGCTGTAAAACCACGATCGGTTTTGGTTCGCCAAACAAGTCTGGTAGCCACGACTGTCACGGTGCACCACTAGGTGA TGCTGAGATTGCTGCTGCACGTGAATTCCTTGGCTGGAACCACGCTGCATTTGAAATCCCTGAAAATGTTTACGCGGGTT GGGATGCTAAAGAAACTGGCGCAGCGCGTGAGTCAAGCTGGAACGATAAGTTCGCAGCTTATGAAGTAGCATTCCCAGAA CTAGCTGCTGAATACAAGCGCCGTGTTATCACTGGCGAACTACCTGCTGAGTTTGAAGAGAAAGCACAAGCTTTCGTTCA AGAGTGCCAAGATAAAGCAGAAGGTATTGCTAGCCGTAAAGCATCACAAAATGCGATTGGTGCATTTGGTGCTATCCTAC CAGAAATGCTAGGTGGCTCTGCAGATCTAGCCGGTTCTAACCTAACGCTTTGGTCTGGTTCTAAAGGTATTCAAGACGAT CCTGCTGGTAACTACATCTATTACGGTGTACGTGAATTCGGCATGAGCGGTATCATGAACGGTGCATCACTGCACGGTGG TTTCATCAACTACGGCGCAACTTTCATGATGTTTATGGAATACGCTCGTAACGCAGTACGTATGTCTGCACTGATGGGCA TTCAGAACATCTTCGTTTATACCCATGACTCTATCGGTCAAGGTGAAGATGGTCCGACTCACCAGCCAGTTGAGCAACTT GCAAACCTTCGTATGACACCAAACATGACGGTATGGCGTCCATGTGATGCGGCTGAAACTGCCGTTTCTTGGAAGAATGC GATTGAACGTCGCAATGCGCCAACATCATTGATCTTTAGCCGTCAAAACCTACCTGCACAAGCACGTACTGCAGAGCAGT TAGCTAACGTGGTTAAAGGTGGTTATGTATTAAGTGATTGTGCTGGCACGCCAGACCTAATCCTTATCGCTACTGGCTCT GAAGTTCAGCTAGCCCTTGATTCTGCTGCAGCATTGACTGAGCAAGGTCAGAAGGTTCGCGTAGTATCTATGCCGTCAAC TAACGAGTTCGACAAGCAAGATGCGGCTTATAAAGAGTCTGTACTGCCAAGCTGCGTGACTAAGCGTGTTGCAATCGAAG CGGCTCACGTCGATTTCTGGCACAAGTATGTTGGCTTTGGCGGCGCGGTTGTCGGTATGACAACCTTCGGTGAGTCTGCT CCTGGCGGCGACCTGCTGAAGTACTTTGGCTTTACAGTTGAAAACGTTGTAGCAACCGTTAACGGTCTATAA Protein sequence : MSSRKELANAIRALTMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPNNPDWVDRDRFILSNGHGSMLIYSLLHLTGY ALPIEELKNFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNKPGHDIVDHFTYCFLGDGCLME GISHEACSLAGTLGLGKLVAFWDDNGISIDGHVEGWFTDDTPKRFESYGWHVIANVDGHDSDAIRAAIEAAKSVTDKPTM ICCKTTIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLGWNHAAFEIPENVYAGWDAKETGAARESSWNDKFAAYEVAFPE LAAEYKRRVITGELPAEFEEKAQAFVQECQDKAEGIASRKASQNAIGAFGAILPEMLGGSADLAGSNLTLWSGSKGIQDD PAGNYIYYGVREFGMSGIMNGASLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL ANLRMTPNMTVWRPCDAAETAVSWKNAIERRNAPTSLIFSRQNLPAQARTAEQLANVVKGGYVLSDCAGTPDLILIATGS EVQLALDSAAALTEQGQKVRVVSMPSTNEFDKQDAAYKESVLPSCVTKRVAIEAAHVDFWHKYVGFGGAVVGMTTFGESA PGGDLLKYFGFTVENVVATVNGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 72 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 66 |
