|
Name : Shal_0754 (Shal_0754) Accession : YP_001672988.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : TraR/DksA family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG1734 EC number : - Position : 934588 - 935031 bp Length : 444 bp Strand : - Note : TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: slo:Shew_3129 transcriptional regulator, TraR/DksA family DNA sequence : ATGCCTCAAGGCACTAGAAAACTTGGCGTGCTCGCTATCGCAGGTGTAGATCCTTACCAGGAAAAACCAGGTGAGGAGTA CATGAACGAGGCTCAATTGGGTCACTTTAAGAAGATTCTTGAAGCATGGCGTAACCAATTGCGCGAAGAAGTTGATCGTA CCCTTAATCACATGCAAGACGAAGCTGCTAATTTCCCAGATCCTGTCGACCGTGCAGCTCAGGAAGAAGAGTTCAGCTTA GAGTTACGCGCTCGTGATAGAGAACGTAAGCTAATTAAGAAGATCGAAAAGACAATGCAACATATCGAAGAAGACGATTT TGGCTTCTGCGAATCTTGTGGTATCGAAATCGGTATTCGTCGATTAGAAGCACGTCCAACAGCCGATCAGTGTATTGACT GTAAAACGCTTGCTGAGATCAAAGAAAAGCAAATGGCAGGTTAA Protein sequence : MPQGTRKLGVLAIAGVDPYQEKPGEEYMNEAQLGHFKKILEAWRNQLREEVDRTLNHMQDEAANFPDPVDRAAQEEEFSL ELRARDRERKLIKKIEKTMQHIEEDDFGFCESCGIEIGIRRLEARPTADQCIDCKTLAEIKEKQMAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00314 | YP_008207779.1 | DnaK suppressor protein | Not tested | AbaR25 | Protein | 2e-45 | 68 |
| BJAB0868_00318 | YP_008211644.1 | DnaK suppressor protein | Not tested | AbaR26 | Protein | 2e-45 | 68 |
