|
Name : murD (Shal_0453) Accession : YP_001672687.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : - Position : 531711 - 533030 bp Length : 1320 bp Strand : + Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : ATGGCTCAGCAATATTCACACATAGTTTTAGGTTTAGGCGCAACAGGTTTATCTGTAGTGCGTTACCTGTGTGGGCAAGG CATCGTTCCTTTAGTGATGGATAGCCGAAACCAGCCTCCAGGGGCTGACACATTAGCAGCAGAGTTTCCTCAAGTTGAGT TGGTAACTGGCGGTTTTGACTGTCGTTACTTAGTACAGGCACAGCAGATCATTATTAGTCCTGGTATTGCGTGTGAAACA CCTGAAGTCAGGGTTGCATTCGATATGGGGATCGAGGTGATCGGTGATGTTGAACTTTTTGCTCGAGAGGTGAGCCAAGG TTCTGCCAAGGTTATCGGGATCACAGGCTCTAATGGCAAGACCACTGTCACTACCTTAGTGGGTGAGATGGCTAAAGCCT GTGGCTGCTCTTATGCCGTCGGTGGCAATATTGGTGTGCCTGCACTGGATCTACTGCTCGAGCCTAAAGAGTTATATATC TTGGAGCTATCGAGTTTTCAGCTAGAGACAACCCATAGCTTGCAGTGTACTGCAGCAACGTGTCTCAACATTAGCGAAGA TCATATGGATCGTTACAGCGATCTAGAGTCATATCGTCAGGCCAAGCTTAAGCTGTATAAGCAGAGCAAAATGGTGCTGT TTAACCGTGAAGATGCGTTAACAGTACCGAATAACCCAACCAACCAAGAAAGTTTTGGTTTAGATGCGCCAGAAATGGAT GCATGGGGAATTTCTGGCGGAATGATAGTACATGGTAGTAGCCAGATCATGGCCGTTAGCGATGTGGCGCTAGTGGGTAG TCATAACCACGCCAATATCATTGCAGCGATGGCGTTAGCGACTGCCGCAGGTATTGAACGAGACTTTCAAATTGAGGTGG CTAAGACGTTTTCAGGTCTTGCCCATCGCTGCGAAGTGGTTGCTGAAATTGCCGGTGTCACGTATGTCAACGACTCTAAG GCAACCAATATTGGTGCTACGGTCGCAGCCATTGACGGCTTAAGCGAGCACTTAGGTGAACTGATTTTAATCGCCGGCGG AGACGGTAAAGGCGCAGACTTTAAACCGTTAGAGCCTGTGCTTGAGAAGGTGAGTCAGCTAATCGTTTTAGGCAAAGACG CTGACAAGATCGCTGCATTAAAACCTGAGGCGATAAAAGTGACCACGATGGCAGAAGCTGTGCTGAAAGCCAATGAACTT GCCACTGCAGGTGATATTGTTATTTTATCACCCGCTTGCTCTAGCTTAGATATGTATCCTAATTTTATGGCGCGTGGCGA TGAATTTCGCAGCTTGGTAGAAGCGCTTCATGGCGAGTAG Protein sequence : MAQQYSHIVLGLGATGLSVVRYLCGQGIVPLVMDSRNQPPGADTLAAEFPQVELVTGGFDCRYLVQAQQIIISPGIACET PEVRVAFDMGIEVIGDVELFAREVSQGSAKVIGITGSNGKTTVTTLVGEMAKACGCSYAVGGNIGVPALDLLLEPKELYI LELSSFQLETTHSLQCTAATCLNISEDHMDRYSDLESYRQAKLKLYKQSKMVLFNREDALTVPNNPTNQESFGLDAPEMD AWGISGGMIVHGSSQIMAVSDVALVGSHNHANIIAAMALATAAGIERDFQIEVAKTFSGLAHRCEVVAEIAGVTYVNDSK ATNIGATVAAIDGLSEHLGELILIAGGDGKGADFKPLEPVLEKVSQLIVLGKDADKIAALKPEAIKVTTMAEAVLKANEL ATAGDIVILSPACSSLDMYPNFMARGDEFRSLVEALHGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 7e-67 | 45 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 7e-67 | 45 |
