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Name : Shal_4242 (Shal_4242) Accession : YP_001676441.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Virulence Product : FliI/YscN family ATPase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 5149920 - 5151260 bp Length : 1341 bp Strand : + Note : KEGG: sbl:Sbal_3976 ATPase, FliI/YscN family; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase DNA sequence : TTGAAGCTTAATGCCGATATTTTAGATTGGCCTAAGGTCCCTGTCGCCCAAGTTTACGGGCGACTAACCAGAGTTAACGG CTTGCTGCTTGAGGCCGTTGGTTGTCAGCTTGGCACTGGCGATCGTTGCTATGTCGAATGCCGCGACAATCACTTAGTCG AGGCCGAAGTCGTCGGCTTCTACAAAGACACCCTCTGCCTAATGCCTATCGAGCCCACCAATGGCCTAATGCCCGGAGCT CGAGTGATGCCCATAGAGGGGCGATGCCAGATACCGACGGGACTTGGCCTACTCGGCCGAGTACTCGATGGTTTAGGTCA ACCACTCGATGACCTAGGTTGTATCAAGCATCTCCCCCACGTGCCTCTGCAGTTTAAGAGCATCAACCCTTTATTACGTA AGCCCATTCGTGACCCCTTAGATGTGGGTATTCGATCAATAAACGCCTTACTCCCCGTTGGCCGCGGTCAGCGCCTAGGG CTTTTTGCGGGCTCGGGTGTCGGTAAGAGTGTGTTACTTGGAATGATGACCCGCTTTACCGAAGCCGATGTTGTTGTCGT GGGCTTAATTGGCGAGCGTGGTCGAGAAGTCAGAGAGTTTATCGAGGAGTCTCTAGGAGAAGAGGGGCGTAAACGCGCCG TAGTGGTTGCCGCCCCCGCCGATACCACTCCCTTGATGCGAATGCGTGCCATGCGTCTATGTCACCATATTGCAGCGGCC TATCGCGACCAGGGTAAGCAGGTGCTGCTGCTTGTCGATTCATTGACTCGATACGCACAGGCGCAGCGTGAAATAGCCCT AAGCTTAGGTGAGCCACCAGCCACCAAAGGTTATCCGCCATCGGCATTTGCTCAGCTACCTAGCTTGGTAGAGATGGCTG GCAATAGCCAACACCCGACCGGAACACTTACCGCCTTTTATACCGTATTAACGGAGGGGGACGATCAGCAAGATCCCATT GCAGACTCGGCAAGGGCAATTCTCGATGGTCATATTGTGCTTAACCGTAAACTGGCCGAGCAGGGACATTTCCCGGCAAT CGATATTGGCGCATCGGTCAGTCGCTTAGCCACTCAGGTCGCAAAGCAGAGTAGTCTAGAACAGGGGCAATGGTTTCGTC ACCTCAATAGCCGTTATAACGAGGTTAAAGAGCTATTGCCATTAGGGGGCTATCAAGCGGGACATGATGCAGAGATGGAT ATGGCGGTGAGAAGCTATCCACAGATGGCAGCATTTTTACGCCAAGCAACCCACACTCAAGCCGACCTAACAAGCAGTCT CAGCGCCTTAGAGCAGTTAGTTAGCCAGATGGGATTTACCCTATCTACAGGGCAGCAATAA Protein sequence : MKLNADILDWPKVPVAQVYGRLTRVNGLLLEAVGCQLGTGDRCYVECRDNHLVEAEVVGFYKDTLCLMPIEPTNGLMPGA RVMPIEGRCQIPTGLGLLGRVLDGLGQPLDDLGCIKHLPHVPLQFKSINPLLRKPIRDPLDVGIRSINALLPVGRGQRLG LFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIEESLGEEGRKRAVVVAAPADTTPLMRMRAMRLCHHIAAA YRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPSLVEMAGNSQHPTGTLTAFYTVLTEGDDQQDPI ADSARAILDGHIVLNRKLAEQGHFPAIDIGASVSRLATQVAKQSSLEQGQWFRHLNSRYNEVKELLPLGGYQAGHDAEMD MAVRSYPQMAAFLRQATHTQADLTSSLSALEQLVSQMGFTLSTGQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-58 | 47 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 4e-70 | 46 |
| ysaN | AAS66842.1 | YsaN | Not tested | SSR-1 | Protein | 8e-57 | 46 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 4e-63 | 44 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 2e-63 | 44 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-63 | 44 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-63 | 44 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-63 | 44 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-68 | 44 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 9e-68 | 44 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-69 | 44 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-69 | 44 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-67 | 44 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-65 | 44 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-65 | 44 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 9e-68 | 43 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-68 | 43 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 2e-58 | 43 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 8e-61 | 42 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 8e-61 | 42 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 4e-59 | 41 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 9e-59 | 41 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 5e-59 | 41 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 2e-59 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shal_4242 | YP_001676441.1 | FliI/YscN family ATPase | VFG1254 | Protein | 5e-108 | 59 |
| Shal_4242 | YP_001676441.1 | FliI/YscN family ATPase | VFG2331 | Protein | 1e-96 | 56 |
| Shal_4242 | YP_001676441.1 | FliI/YscN family ATPase | VFG2499 | Protein | 4e-98 | 54 |
| Shal_4242 | YP_001676441.1 | FliI/YscN family ATPase | VFG0390 | Protein | 2e-71 | 47 |
| Shal_4242 | YP_001676441.1 | FliI/YscN family ATPase | VFG0192 | Protein | 8e-69 | 46 |
| Shal_4242 | YP_001676441.1 | FliI/YscN family ATPase | VFG0048 | Protein | 6e-70 | 45 |
| Shal_4242 | YP_001676441.1 | FliI/YscN family ATPase | VFG0515 | Protein | 1e-63 | 44 |
| Shal_4242 | YP_001676441.1 | FliI/YscN family ATPase | VFG2144 | Protein | 6e-69 | 42 |
