|
Name : hemC (Shal_3917) Accession : YP_001676116.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0181 EC number : 2.5.1.61 Position : 4753759 - 4754691 bp Length : 933 bp Strand : + Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis DNA sequence : ATGTCTCAAAATCTGATCCGAATCGCAACTCGTAAGAGCCCTCTTGCCATGTGGCAAGCCGAATTTGTGAAAGCTGAACT GGAAAAAATCCATGAAGGCCTCACAGTAGAATTGCTACCAATGAGTACCAAAGGTGACATCATCTTAGACACCCCACTGG CTAAAGTCGGTGGTAAAGGCTTGTTCGTTAAAGAGTTAGAAGTCGCTATGCTAGAAGGCAAAGCCGATATCGCTGTTCAC TCAATGAAAGACGTACCCGTTGAATTCCCAGAGGGTCTAGGCCTTGAGGTGATTTGTGAGCGTGAAGATCCACGCGACGC ATTCGTATCAAACACCTATAAAACTATTGAAGATCTGCCACAAGGCGCAGTAGTTGGCACCTCTAGTCTACGTCGTCAGT GCCAAATTCGTGCTGCTCGCCCAGATCTCGTCATCAAGGATCTGCGCGGTAACGTGGGGACTCGTCTAGCAAAACTAGAT GCGGGCAACTACGATGCCATTATTCTTGCAGCTGCAGGCCTTAAGCGTCTAAAACTAGAAGAAAGAATCGCTAGCTTTAT CTCTGCAGAGCAATCACTACCTGCAAACGGCCAAGGCGCTGTCGGTATTGAATGTCGTACTGATGACGCTCGTGTTAAAG CGCTACTGGCTCCACTTGAGCACGCTGAAACTCGTATGCGCGTTACAGCAGAACGTGCTATGAACACCCGTCTTGAAGGT GGTTGTCAGGTACCTATCGGCGCATACGCCGAAATCGACGGCGACACATTAAGCCTACGCGGCCTAGTGGGTAACCCAGA TGGTAGCCAAATCATCACTGCTGCGTCTTCTGGTAATAAGGCCGATGCCGAAAAGCTAGGTGTTGCTCTAGCAGAAGAGT TACTCGCCAAGGGTGCTAAAACCATTCTTGACGCTGTTTACGCGAACGCGTAA Protein sequence : MSQNLIRIATRKSPLAMWQAEFVKAELEKIHEGLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEGKADIAVH SMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIEDLPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLD AGNYDAIILAAAGLKRLKLEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRLEG GCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKGAKTILDAVYANA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 5e-77 | 63 |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 5e-77 | 63 |
