|
Name : hslU (Shal_3867) Accession : YP_001676066.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 4690480 - 4691805 bp Length : 1326 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTGAGATGACACCACGTGAAATTGTTCATGAGCTAGATAGCCACATTATTGGTCAGCAAAAAGCCAAACGTTCGGT GGCTATTGCCCTACGTAACCGCTGGCGCCGTATGCAGCTTGCAGCCGATCTTCGTCAAGAAGTCACGCCAAAGAACATTC TAATGATTGGTCCAACCGGTGTCGGTAAAACCGAGATCGCTCGTCGCCTAGCCCGCCTAGCCAAAGCGCCATTCATTAAG GTTGAAGCGACTAAGTTCACCGAAGTCGGCTATGTCGGTAAAGAAGTCGAGCAGATCATTCGCGATCTAACCGACTCAGC TATCAAGCTGACCCGCGAAGAGCAGATCAAAAAATGTAAGTTCCGCGCTGAAGAAGCTGCCGAAGAGCGCATTTTAGATG CCTTGCTGCCTAAGCCTAAAGAAGATTGGGACAGCGAAAAATCAGATGGCAGTGCAACTCGCCAAATTTTCCGTAAAAAA CTACGTGAAGGTCAGCTAGACGATAAAGAAATTGAGATCGATGTTTCTGCACCGCAAGCTGGTATTGAGATAATGTCTCC TCCTGGTATGGAAGAGATGACCAATCAGCTACAAAGCATGTTCCAAAATATGGGACCAGGTGCTAGCAAGCGTCGCAAGA TGCCAATCAAAGAAGCTTACAAGCTATTGATTGAAGAGGAAGCGTCTAAGCTTATTAACCAAGAAGATCTTAAAGAGCAA GCGATTGAACTGGTTGAGCAACACGGCATCGTGTTCCTAGATGAGATCGACAAGATCTGTAAGCGCGGTGAATCATCAGG CCCAGACGTTTCTCGTGAAGGTGTGCAACGCGATCTACTTCCTCTCGTTGAAGGTTGTACGGTTAACACTAAGCACGGCA TGGTAAAAACAGATCATATCTTGTTTATCGCCTCTGGTGCTTTCCAGATGTCTAAGCCTTCGGATTTGATCCCTGAGCTT CAGGGTCGTCTACCCATTCGTGTTGAGTTAGATGCTCTGTCTGCGGGTGATTTTAAGCGTATTTTAACCGAACCACACGC ATCTTTGACTGAGCAGTATATTGCTTTGATGGGTACAGAAGGCGTTACGATTGAATTTACCGAAGATGGTATTGATAGTA TTGCTGAAGCGGCATGGCAAGTGAACGAGCGCACAGAAAATATCGGTGCCCGTCGTCTACACACTGTTATGGAGCGCTTA ATGGAAGAGCTTTCTTTTGAGGCTTCTGACAAGTCAGGCTCTGTTACGGTTATCGATGCGGCTTATGTGAAAGCAAGCTT AGATAACTTGGTGCAAGACGAAGACTTAAGTCGCTATATTCTTTAA Protein sequence : MSEMTPREIVHELDSHIIGQQKAKRSVAIALRNRWRRMQLAADLRQEVTPKNILMIGPTGVGKTEIARRLARLAKAPFIK VEATKFTEVGYVGKEVEQIIRDLTDSAIKLTREEQIKKCKFRAEEAAEERILDALLPKPKEDWDSEKSDGSATRQIFRKK LREGQLDDKEIEIDVSAPQAGIEIMSPPGMEEMTNQLQSMFQNMGPGASKRRKMPIKEAYKLLIEEEASKLINQEDLKEQ AIELVEQHGIVFLDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVNTKHGMVKTDHILFIASGAFQMSKPSDLIPEL QGRLPIRVELDALSAGDFKRILTEPHASLTEQYIALMGTEGVTIEFTEDGIDSIAEAAWQVNERTENIGARRLHTVMERL MEELSFEASDKSGSVTVIDAAYVKASLDNLVQDEDLSRYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 9e-97 | 47 |
