Gene Information

Name : Shal_3773 (Shal_3773)
Accession : YP_001675972.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Virulence
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 4582600 - 4583157 bp
Length : 558 bp
Strand : +
Note : PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ppd:Ppro_1125 resolvase, N-terminal domain

DNA sequence : 
GTGGCACACATTGCCTATCTCCGAGTCTCCACAGTAGAGCAGAACACTGACCGCCAACTCAACGATACATGTATCTCCTT
TGATAAGACCTTCACTGATAAATGCAGTGGTGGTACAACCAAACGACCAGCCTTAACGGAACTAAAAGACTACGTTAGGG
ATGGTGACATTATTCATGTACATAGCATTGACCGCCTTGCTCGTAACTTGGTTGATTTAAAGCAACTGATTAATGAATGG
AATAGCCAAGGTATAACCGTCAAGTTCCATAAAGAAGGTCTAAGCTTTAATGCTGGTGGTAACGACCATATGTCAGAGCT
AATGCTTAACATGCTTGGTGCTGTAGCTCAGTTTGAATTAGCGATGATTCAGGAGAGGCGTCAGGAAGGCATTGAGAAGG
CTAAAGCAGCAGGCAAATACAAAGGTAGGCCTACTAACGAATTAAGCCACCAGCGGATCTCTGAGCTACGTTCTCAAGGG
GTTTCACTAAGGAAGATTGCCAAGGAAATAGGCGTATCATTATCTACAGTACAAAGGGCTTTAGCGGCTAATGAATAA

Protein sequence : 
MAHIAYLRVSTVEQNTDRQLNDTCISFDKTFTDKCSGGTTKRPALTELKDYVRDGDIIHVHSIDRLARNLVDLKQLINEW
NSQGITVKFHKEGLSFNAGGNDHMSELMLNMLGAVAQFELAMIQERRQEGIEKAKAAGKYKGRPTNELSHQRISELRSQG
VSLRKIAKEIGVSLSTVQRALAANE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res YP_005124341.1 DNA-invertase Not tested Not named Protein 6e-25 50
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 8e-33 46
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-32 46
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 8e-33 46
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 1e-31 45
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 6e-31 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shal_3773 YP_001675972.1 resolvase domain-containing protein VFG1030 Protein 3e-33 46