Gene Information

Name : Shal_3700 (Shal_3700)
Accession : YP_001675899.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 4500383 - 4501360 bp
Length : 978 bp
Strand : +
Note : KEGG: slo:Shew_3306 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)

DNA sequence :
ATGGTAGATGCAAATCAACTACGCCAATGGGGTACTAAGGTTATCGATATCGAGAAACAAGCACTCGATAATCTGTATCA
GTACATCGACTCTTCAGAATTTGCCCAAGCTTGCCAATTAATATTGCAATGCACAGGTAAAGTTATCGTGATGGGCATGG
GAAAATCGGGCCATATTGGCAACAAGATTTCAGCCACCTTGGCTAGTACAGGTACGCCTGCATTTTTCGTACACCCAGGA
GAAGCCAGCCATGGCGACCTTGGCGTGCTCAGTGAAAACGATATCGTACTTGCGATTTCAAACTCGGGCGAGTCGAGTGA
GATCTTAACCTTAATGCCAGTCATTAAGCGTATGGGACTGCCTATGATCTCTGTTACGGGTAAGCCTGACTCGAATATGG
CGAAACTGGCTCAGCTACATCTTTGCATCGAAGTACCAGAAGAGGCCTGCCCGCTCGGGCTCGCACCGACATCAAGTACG
ACTGCAACCTTGGTAATGGGTGACGCTCTAGCCGTTGCATTATTGCAGGCTCGTGGCTTTACTCAAGATGACTTTGCACT
GTCTCATCCTGGCGGTAGCCTAGGTCGTAAGCTACTACTTAAAGTCAGCGATGTTATGCATAAAGGTAATGAACTACCTA
GCGTCCAAGATGATATCTGTATTACCGAAGCGCTATATGAGATCTCTAAAAAAGGTTTAGGTATGACGGCGGTCGTCGAC
TGCAACAACACCTTAGTCGGTATTTTCACCGATGGCGATCTACGCCGCGTTATCGATGCTGAAGTCAATTTAAGAACCAC
ACCTATTGCAGAGGTGATGACTAAGGGCTGCGTCACGATTACTGATAATGTACTTGCAGCAGAAGCGTTAAAAGTCATGG
ATACTAAAAGTATTAATGGCTTAATCGTAATTAATGACAAACAACAGCCGGTTGGCGCACTAAACATGCTAGATATGGTT
AAAGCGGGAGTAATTTAA

Protein sequence :
MVDANQLRQWGTKVIDIEKQALDNLYQYIDSSEFAQACQLILQCTGKVIVMGMGKSGHIGNKISATLASTGTPAFFVHPG
EASHGDLGVLSENDIVLAISNSGESSEILTLMPVIKRMGLPMISVTGKPDSNMAKLAQLHLCIEVPEEACPLGLAPTSST
TATLVMGDALAVALLQARGFTQDDFALSHPGGSLGRKLLLKVSDVMHKGNELPSVQDDICITEALYEISKKGLGMTAVVD
CNNTLVGIFTDGDLRRVIDAEVNLRTTPIAEVMTKGCVTITDNVLAAEALKVMDTKSINGLIVINDKQQPVGALNMLDMV
KAGVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-57 44
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-57 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-57 44