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Name : Shal_3670 (Shal_3670) Accession : YP_001675870.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4471286 - 4472692 bp Length : 1407 bp Strand : - Note : KEGG: slo:Shew_3278 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase DNA sequence : ATGTCACAACAACGCGCCTTTAAGGGCAAAGAGAAACCAAGAGATCTTCAGATGGACGCGCTGAAGATGCCACCGCATTC AATTGAAGCTGAACAATCGGTTCTCGGTGGCTTGATGTTGGACTCTGAAGCTTGGGACAGAGTGGCTGAAGCCGTTGTAA AAGAAGATTTCTATTCTCGTGCCCACGCCACAATTTTCACCGCGATGGAATCTTTGGTTAGTGCGGGTCAACCTATTGAC TTGATTACCGTATCTGAACAGTTGGAGCTTGAAGACCAACTCGAAGATGTGGGCGGTTTTGCCTATATCGGAGAGATAGC TAAAAATACCCCGAGTGCGGGTAACATCCTCTCTTATGCCAATATTGTGCGTGAGCGTGCCGTTGTTCGCGATATGATTA AAGTGGCCAACGAAATTGCCGACGCAGGTTTTAATCCAGAAGGACGTAATTCGAGTGAACTGCTCGATTTAGCCGAAACC AAAGTCTTTAAAATTGCCGAACAGCGCGCCAATGCCAACGAAGGTCCTGAAGGCATTAAGACGATTCTTGAAAAAACTGT CGATAAGATTGAAGCGCTCTACAATAACCCTACTAACGGTGTCACCGGGGTTTCTAGCGGTTTTGGCGACTTAGATAATA TGACGGCAGGTTTTCAATCGGGCGACTTGATCATCGTTGCCGCGCGTCCATCTATGGGTAAAACCACCTTTGCGATGAAC TTGTGTGAACAGGCGGCGCTGCATGAAGACAAGCCCGTGCTAATTTTCAGCTTGGAGATGCCTTCAGAACAGATCATGAT GCGTATGTTGGCATCCTTAGGCCGTGTCGACCAGACAAAAATTCGTACCGGTCAGTTAGATGATGACGATTGGGCGCGCG TTTCCTCTACAATGGGGATCATGCTTGAGCAAGGTAAGATGTATATCGATGATGGCTCAGGATTAACCCCAACCGATGTA CGCAGCCGAGCCAGACGTGTCGCCCGAGAATACGGCGGCCTGTCGATGATCATGATCGATTACCTGCAGTTGATGCAGGT GCCAGCGTTAAAAGATAACCGTACTTTAGAGATTTCAGAAATCTCACGCTCACTTAAAGCCTTGGCAAAAGAGCTAGAGA TCCCTGTGGTTGCATTGTCACAGCTTAACCGTTCATTGGAGCAACGTGCCGATAAACGCCCTGTAAACTCGGATTTGCGT GAATCGGGCGCGATTGAGCAGGATGCTGATTTGATCATGTTTATTTATCGTGATGAAGTGTATAACAACGACTCCGAAGA TAAAGGCACCGCTGAGATCATTATTGGTAAGCAACGTAACGGCCCTATTGGGCGTGTACGCTTAACCTTCCAAGGCCAAT TCTCACGATTTGACAATTATGCGGGTCCGCAATTCGAAGAAGATTAA Protein sequence : MSQQRAFKGKEKPRDLQMDALKMPPHSIEAEQSVLGGLMLDSEAWDRVAEAVVKEDFYSRAHATIFTAMESLVSAGQPID LITVSEQLELEDQLEDVGGFAYIGEIAKNTPSAGNILSYANIVRERAVVRDMIKVANEIADAGFNPEGRNSSELLDLAET KVFKIAEQRANANEGPEGIKTILEKTVDKIEALYNNPTNGVTGVSSGFGDLDNMTAGFQSGDLIIVAARPSMGKTTFAMN LCEQAALHEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGIMLEQGKMYIDDGSGLTPTDV RSRARRVAREYGGLSMIMIDYLQLMQVPALKDNRTLEISEISRSLKALAKELEIPVVALSQLNRSLEQRADKRPVNSDLR ESGAIEQDADLIMFIYRDEVYNNDSEDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-97 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-101 | 52 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-101 | 52 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-101 | 51 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-100 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-92 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-92 | 49 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-85 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-78 | 45 |
