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Name : Shal_3494 (Shal_3494) Accession : YP_001675698.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG1744 EC number : - Position : 4256966 - 4261486 bp Length : 4521 bp Strand : - Note : KEGG: vvu:VV1_0767 hypothetical protein DNA sequence : ATGAAAAAAACAATTTTAACACTGACGTTATTAATACTGATTGGAGGTTGTGGTGATGATGAACCTGTTGCGCCGTCGAT CCCCTTAATTCCATTGGAGCCATCGACGCCAGTGGTTCCCTCTATTCCACTAGAGCCATCTACACCGATTAAACTTGAAA TTAGCGTGTCACTAGACGGAACATTACTATTGGGGGAGCCTATTCGTTGTAATGACCAAAAGCCTAATGGTTTTGAAATC GAAATCGGCGACACGGTTTCTTGTCTCTATAACAATATGCCGCTACTAACATTCAGTGACGTGAGAGCGGATATAGCACG AGCAGCAGCGCCAACTGAGCGTAAACAATTGCTCTTAATTGATGCCGATGAATTTATCGAACACCCTGAAAATGCATCGA ATGCTCAAACTCTGATTAAGACCATGGGAGTTGTGCGGGGCGGGCAAATCGATATAGAGCTATCGACATTGCAGGCATTG CAGTTTGAAAATAACTACCTCAATAATTTATCCATGGCTGAGGAGGATTTCAAAAACTTGCTAGAGCAGCAAGCCAACGA TGCTCAAGCTGACAAACTCCCCTCTACCCATCTTCCCGACATAAAGCCTGAGGTGAGTACTGGTACATCTACGGATTTAA ATGCTCACTTTGTCGCGGCCGATGCAGAGGCGGCATACCAGTATAAGCCTGAGCAGAATATTCTATCCACTGCGATACTG ACTGACAGCCAAGGCAAACCTGTTGCGGGTATTACCTATTTCAGCCGCAGCAGCCGTGGGATTACGGACTTAGATGGTTC GTTCCAATTTTCTTGGGGCGATAGCGTCAGCTTTGGCATCGATACTTTTGAGCTTGGAGAGGTTCGCGGTAATCAGAAAA GTTACACATTGAGTCAGCTTGGCGAAGGTAATAACGGCCTCAATGCCGAGGCGTTAGTGTTACGTTATGCCACAAGCCAA GGGCAAGCTTGGCAATTGCCTGCGCGGGTTGCTGAAGTCTTTGCTAGGTATCCTAACGTGATAAATGAAATCATCTCTTT ATCTCTAAGTAGTCAAGAGAAGGTGTTAGATACGGGTAATGGAGAGCAAATAATCGCTGCCAAATTTAGTAAACAATTTG AGTTAGGGCTCGCCAGAGATATTGATAGCGTGTTGTGTGACATCAACTGTCAACAAACAGCTAAAGCAAGAGAGCTATTA CCTGAAGTGCAATCTGAGGGCGCAGACATTGTTAGAGCCTTAAACAATGTCACCGATGACAGTGGTCAGATTCTAGCTGA CATTCAGCGTCTATGGGGCACAACATCTGATGCTGGTTGGAATAAAGTCAGTGCTTTTCATGTGTTTCATGACAGTACCA ACTTTTATGGCAGTACAGGTAATGCTCGTGGTCAGGCTACCGTTAATATCGCTAACAGCGCTTTTCCTGTGATGATGGCC CGTAACGATAATAACTACTGGATCCCTTTTGGTGCTAACAAAGCGTGGGATAAAGATACCCTCGCGTATATTACCGAAGC ACCATCGACAGTGGTACCTGACAAGGTCAGTGGCGAAACCGCCACCTTTAATCTGCCTTTTATCAGCATTGGTGAAATAG GTTTAGGCAAGATTATGGTCATGGGTAATGCTCGCTATAACTCAGTGCTAGTTTGCCCTAATGGCTATAGTTGGAATGGT GGCATCGACGACAAGAGCCAGTGCCGAGTCGCTAGTGACAGTGATGATATGAAGCACTTCTTCCAAAATAGCCTCAAATA TCTGACTAATGGCAAGTCTGGCTACAGCGTTGGTACCAACATGCCCTACGTTTATTTTAAGCGTGGTGGTCAGGTAACAG GTGAGCAAGAACCTTTTATCATCGATCCTGTCTTTGGTGTGACGACTGAGCAGGTGGTAAGTTTTGCAGGCATTGACCCG CAAACTATGCCGCTACTCATCCTCAATGGTTTTGAATACACTATTAATACCAGCGGCAGTCACTATACTCTGCCGATGCA AGCCGATACGACTCAGCCAAAGTTGACTCAAGATGATGTCACGGCGTTAATTGATTACGTCAATAACGGCGGCAACATCA TGATTATGGAGACTCTTGCTGGTACCAATAATACGGGCGCCTTGTCGCGTTTACTCGACAGTGCTGGTATTGCCTTTGGT ATGGGAGGCTCAGTCGTTGCTAATGGTAACGGCCCTAGTGGTGGATATGCCGATCGCGTCCGTAACCAGCGTGGTGATGG GATCTGGATCATTGAGCGTTATGCAGCCGTAGAAGGCGAAGATGGCACACCGACATCTCCTTATATCATTAACCAAGCCG ACGGCAGCGTAGATTGGCTCTATAAGCAGCAGAGTAAGCCTGATGATAAACCAAGTCTATCCGTTGCCAAATGGGTTGAG ACTGATGAGGATGGAGTTGAAACGACTCACACTGCGTTTATTGATGAAAGCCAAACCGATGATCTCAATGCGGCTAAAGC GCTCATCTTGTCTGCTTTCACCAAGTCAGATGGCTCGCCTGCCTATCAGGAGTGTACCAACCCCAATTTTCATTATGAGA TCAACTGCCTTGAATATAGGCCCGGTAACAATATCCCGGTTACCGGAGGCATGTTTGTCCCTCGGTATACACAGTTAGAA CTGGGTGATGCACAAGCTCGCGCCATGGTAAAAGCGGCTGATTTAGGCACCAATATTGAACGCTTATATCAACATGAGCT CTATTTCCGCAGTCGAGCTCAACAAGGCGTACGCTTATCGAATGTTGATCTCAACCGTACCTATCAAAATATGACGGTAT GGTTGTGGAACAATCTCGATTATCGCTATGAGTCAGGCCTTGATGATGAGTTAGGCTTCGAGCGCTTTACTCAGTTTTTA AACTGTTATAGCGACAATCGGGCTCAAGGCGGCACTCACTGCCCCGTTGAGTTGCAACAGCAGATGTTGTCATTGCAGAT GATCCTCGGTCAAGAGAGTGGTGAATACAAAGGATACATGAATCCGAGTTATCCTTTGAACTACATGGAAAAACCACTGA CTCGTTTGATGCTAGGCCGCTCTTTCTGGGATCTAGATATTAAAGTTGACCCACGTCTGTTCCCAGGGGAAGCAATGGGC TCTCAAGGTGGAGGACAAGTTACATTCGACTTGAGTCATAACACTGCTGCCTGGTTTGCCGGAAATCGTCAACCTACAGG GCAATGGGCTGTTGCACAGCAGTCGTTTACCGTATCGGTTAATGGCAGCGCAGACCCCGTTACCATTACTGTGGCTTTGG CCGATGATCTTACCGGGCGCGAAAAGCACGAACTTGGCCTTAAGCGACCACCGCGTATGACTCAGTCATTCACACTAAAC TCAGGTGATATTGGTAGCAGCTACAGTTTAACGTCACCCTATGGCGGTTTAATTTATGTCCAAGGTCAAGGTAGCCAAGA AGGACATAATGTAACCCTGAACTTTACTGGTAGTGTCGACGCGCCGCTTTATCAGTATGATGGTAAAGGCGGACAATGGC TGAATCCGCTAGATTCCCCTGCGCCTATTGGTGAAGTCATATCTCAAAGCTTTGTTTATACCGCAGCTAAAGCCAACCTT AACGCGGCCAATTACAACGGCAGCCCAGAGCAGTTTGCTAAAGAGCTGGATACTTTTGCTGAGGATATGAATAACTTCTA TAGCCGCGATGAAGCGCTACAAGGAAATCTAAACCGTAAAGCGACCGATAGTAGTATTCCAACTAATCGTCATCACTTTG TTAATGACATCGCTATCAGTATCGGAGCGGCCCACTCAGGTTATCCGGTGATGAATGCAAGCTTTAACGCTGAGAGTCAT AACCTTGCGCTCACACCGTTAAACTCTTGGTTGCTATGGCACGAGGTTGGCCATAATGCTGCTGAGGCACCGTTCAATGT CGATGGTGCGACGGAAGTGGTTAACAATCTGCTCGCGCTTTATATGCAAGATAAACATCTCGGCAAGATGAGTAGAGTTG AGCAGGATATCCGCATCGCACCTGATTTCGTCGCATCTGAAAATGGTCATGCTTGGGCTGCGGGCGGCGCGGGTGAGCGT TTGGTGATGTTTGCTCAGTTAAAAGAGTGGGCCGAAACTGAATTTAATATCGATAATTGGTATTCAGAAGGGGTTTTACC CGCTTATTACGATAGCGCAACAGGTTTGCAAGGCTGGAACCTATTTAAACTGATGCACCGTTTAACCCGTAATATTGATG ACAAGCAGTTTGTGCTCAAAGGCGATAATCTGTGTCATCGGCAAGAGGGTATAGGTAAGAGTGATCAGCTCTTACTCTGC GCCTCTTATGCGACTCAAATGGATCTCAGTGATTTCTTCCGCGCTTGGAACCCGGGAAGCAAAGCCTTTATTTATCCTGG TGACCTAACTCCTCAGTATGAGGGGGGGATCTCTGCGGCGGGATTAGCAAAAGTTGCCGCATTAAACTTACCTAAGCCAA CACGCGATCCACTTCAAATTGACCGCATTACCGTGAGATAG Protein sequence : MKKTILTLTLLILIGGCGDDEPVAPSIPLIPLEPSTPVVPSIPLEPSTPIKLEISVSLDGTLLLGEPIRCNDQKPNGFEI EIGDTVSCLYNNMPLLTFSDVRADIARAAAPTERKQLLLIDADEFIEHPENASNAQTLIKTMGVVRGGQIDIELSTLQAL QFENNYLNNLSMAEEDFKNLLEQQANDAQADKLPSTHLPDIKPEVSTGTSTDLNAHFVAADAEAAYQYKPEQNILSTAIL TDSQGKPVAGITYFSRSSRGITDLDGSFQFSWGDSVSFGIDTFELGEVRGNQKSYTLSQLGEGNNGLNAEALVLRYATSQ GQAWQLPARVAEVFARYPNVINEIISLSLSSQEKVLDTGNGEQIIAAKFSKQFELGLARDIDSVLCDINCQQTAKARELL PEVQSEGADIVRALNNVTDDSGQILADIQRLWGTTSDAGWNKVSAFHVFHDSTNFYGSTGNARGQATVNIANSAFPVMMA RNDNNYWIPFGANKAWDKDTLAYITEAPSTVVPDKVSGETATFNLPFISIGEIGLGKIMVMGNARYNSVLVCPNGYSWNG GIDDKSQCRVASDSDDMKHFFQNSLKYLTNGKSGYSVGTNMPYVYFKRGGQVTGEQEPFIIDPVFGVTTEQVVSFAGIDP QTMPLLILNGFEYTINTSGSHYTLPMQADTTQPKLTQDDVTALIDYVNNGGNIMIMETLAGTNNTGALSRLLDSAGIAFG MGGSVVANGNGPSGGYADRVRNQRGDGIWIIERYAAVEGEDGTPTSPYIINQADGSVDWLYKQQSKPDDKPSLSVAKWVE TDEDGVETTHTAFIDESQTDDLNAAKALILSAFTKSDGSPAYQECTNPNFHYEINCLEYRPGNNIPVTGGMFVPRYTQLE LGDAQARAMVKAADLGTNIERLYQHELYFRSRAQQGVRLSNVDLNRTYQNMTVWLWNNLDYRYESGLDDELGFERFTQFL NCYSDNRAQGGTHCPVELQQQMLSLQMILGQESGEYKGYMNPSYPLNYMEKPLTRLMLGRSFWDLDIKVDPRLFPGEAMG SQGGGQVTFDLSHNTAAWFAGNRQPTGQWAVAQQSFTVSVNGSADPVTITVALADDLTGREKHELGLKRPPRMTQSFTLN SGDIGSSYSLTSPYGGLIYVQGQGSQEGHNVTLNFTGSVDAPLYQYDGKGGQWLNPLDSPAPIGEVISQSFVYTAAKANL NAANYNGSPEQFAKELDTFAEDMNNFYSRDEALQGNLNRKATDSSIPTNRHHFVNDIAISIGAAHSGYPVMNASFNAESH NLALTPLNSWLLWHEVGHNAAEAPFNVDGATEVVNNLLALYMQDKHLGKMSRVEQDIRIAPDFVASENGHAWAAGGAGER LVMFAQLKEWAETEFNIDNWYSEGVLPAYYDSATGLQGWNLFKLMHRLTRNIDDKQFVLKGDNLCHRQEGIGKSDQLLLC ASYATQMDLSDFFRAWNPGSKAFIYPGDLTPQYEGGISAAGLAKVAALNLPKPTRDPLQIDRITVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 58 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 56 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 56 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 55 |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shal_3494 | YP_001675698.1 | hypothetical protein | VFG0106 | Protein | 0.0 | 56 |
