Gene Information

Name : Shal_3435 (Shal_3435)
Accession : YP_001675640.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4183747 - 4184496 bp
Length : 750 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO_3692 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTTATCGATGAACAACATTAGCAAGGTATTTAAAACGGATTTAGTTGAAACCCATGCTTTGCGCGATTTCAATCTAGA
AGTTAGCGAAGGTGAGTTTGTTGCGGTTACGGGACCATCGGGGTCAGGCAAAACCACTTTCCTTAATATTGCCGGACTGC
TCGAAGGCTTTACCCATGGCGATTACTTTCTCGATGGTGTCAATATCTCTAACTTGAGTGATAACCGGAGCGCTGCAATC
CGTAATGAGAAAATTGGGTTTATCTTTCAGGGATTTAATCTTATCCCTGATCTGAACTTGGTCGAAAACGTCGAGGTACC
GCTACGCTACCGCGGCTTCAATGCGAAAGAGCGTAAAATTCGGGTCGAACGGGCGCTCGAACAAGTGGGGCTCGCATCGA
GGATGAAGCACCTTCCCTCTCAGTTATCGGGTGGCCAGCAGCAAAGGGTAGCGATAGCCCGAGCACTGGCGGGGGAGCCA
AGGTTTTTACTCGCCGATGAACCAACAGGCAACTTAGACAGCCTAATGGCTCGCCAGGTGATGGAGCTGCTAGAAGATAT
TAATAAGGCGGGCACCACGATTATCATGGTGACTCACGACGCCGAATTAGCCCGTCGGGCGCAGCGTAATATTCAGATTA
TCGATGGCCAAGTATGTGATTTTACAATGTATCAAGCAGGGATGGAGCCACAAGGCCGATCGGCACAAGCTAGAGTTCAG
TCAGTATCTGATGCGGCTTCGGTTGCTTAA

Protein sequence : 
MLSMNNISKVFKTDLVETHALRDFNLEVSEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGVNISNLSDNRSAAI
RNEKIGFIFQGFNLIPDLNLVENVEVPLRYRGFNAKERKIRVERALEQVGLASRMKHLPSQLSGGQQQRVAIARALAGEP
RFLLADEPTGNLDSLMARQVMELLEDINKAGTTIIMVTHDAELARRAQRNIQIIDGQVCDFTMYQAGMEPQGRSAQARVQ
SVSDAASVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shal_3435 YP_001675640.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-51 50
Shal_3435 YP_001675640.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-45 50
Shal_3435 YP_001675640.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-37 46
Shal_3435 YP_001675640.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-31 41