|
Name : leuS (Shal_3228) Accession : YP_001675434.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : - Position : 3933701 - 3936307 bp Length : 2607 bp Strand : + Note : leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl DNA sequence : ATGGGCGGCATAGCCGGAAATAGATTGATGCAAGAGCAATATACTCCTTCAGAAATTGAAGCTAAAGTGCAGCAGCACTG GCAAGACACAAAAACATTTGAAGTTACCGAAGATGCGAACAAAGAAAAGTTCTACTGCCTTTCTATGTTCCCATATCCGT CAGGTCGACTGCACATGGGCCACGTACGTAACTACACCATAGGCGATGTTGTGTCTCGTTACCAACGTCTGCAAGGTAAA AACGTGCTTCAACCTATCGGTTGGGACTCTTTCGGTCTTCCAGCTGAAAACGCCGCTATCAAAAATAGCACAGCGCCTGC GCCTTGGACTTACGAAAACATCGACTACATGAAAAACCAGCTAAAAATGCTAGGTTTTGGCTATGACTGGTCACGTGAAA TTGCAACTTGTACGCCAGAATACTATCGCTGGGAACAGTGGTTCTTCACTAAGCTTTATGAAAAAGGCTTAGTGTATAAA AAGACCTCATCTGTTAACTGGTGTCCAAACGATGAAACCGTGCTTGCGAACGAGCAGGTTATCGACGGCTGTTGCTGGCG CTGTGATACTACTGTAGAGCAAAAAGAGATCCCACAGTGGTTCATTAAAATCACTGAGTACGCCGAAGAGCTACTTAACG ATCTTGACCAGCTAGACGAGTGGCCAGAGCAAGTTAAGACCATGCAGCGTAACTGGATTGGTCGCAGTGAAGGTATCGAA ATGACCTTCCAAGTTGCTGACAGTGACCAGAGCTTTGATATCTATACTACGCGTCCTGACACGGTTATGGGCGTGACCTA TGTAGCGATTGCTGCCGGGCACCCATTAGCGGAGCAAGCTGCTATCAATAACCCAGCGTTGGCTGAGTTTATTGAAGAAT GTAAAAACGCCGATACCACCGAAGCGGCTATGGCTGCGATGGAAAAGAAAGGTGTTGCTACAGGACTAAACGCTATCCAC CCAATTACTGGCAAAGAAGTGCCTATCTGGGTGGGTAACTTTGTACTGATGAACTACGGTACTGGCGCAGTGATGTCTGT ACCTGCTCATGATCAACGCGATTACGAGTTTGCTAAGAAGTACAGTCTAAACATCGAAGCGGTTGTTAAGCCTGCTGACG GCGAAGTTGATATCAGCGAAGAAGCTTACACTGAAAAAGGTGTACTGTTTAACTCAGCTGAGTTTGATGGTCTAGACTTT CAAGCTGCGTTCGATGCCATCGACGCCAAGCTTACAGCTGAAGGCAAAGGTAAGCGTCAAGTGAACTTCCGTCTACGCGA CTGGGGTGTTTCACGCCAACGTTACTGGGGTGCTCCAATCCCAATGGTCACTTTGGCTGATGGCACGGTTATTCCGACTC CTGAAGATCAACTACCAGTGATTTTGCCTGAAGATGTGGTTATGGATGGTATCCAGAGCCCTATCAAATCAGATAAAGAG TGGGCTAAGACAACCGTTAACGGTCAAGAAGCATTCCGTGAAACAGATACCTTTGACACCTTTATGGAGTCATCTTGGTA TTACGCACGTTACTGTAGCCCGCATGCCGATCAAATGCTTGATCCAGCAAAAGCCAACTACTGGTTACCAGTAGACCAAT ACATTGGTGGCATTGAGCATGCGTGTATGCACCTATTGTATTTCCGCTTCTTCCATAAGTTATTACGTGATTCAGGCTTA GTAAACTCTGACGAGCCAGCTAAACGTCTACTGACTCAAGGTATGGTACTGGCTGATGCTTACTACTACAACAATGAGAA AGGCGCGCGCGTTTGGGTTGCACCATCAGATGTTACCGTTCTAGAAACTGACGATAAAGGCCGTACAGTTAAAGCCGTAG ACAGTGAAGGCAACGAGCTGGTTTACACCGGTATGAGCAAGATGTCTAAGTCTAAAAACAACGGTATCGACCCACAAGAG ATGGTTGATAAGTACGGCGCAGACACGGTTCGTCTATTCATGATGTTTGCAGCGCCACCAGAGCTAACTCTGGAATGGCA AGAGTCGAGTGTTGAAGGCGCGCATCGCTTTATTAAGCGTTTGTGGAAAACTGCACACGACCACATTGCGACAGGCCCAA CAGCAGAGCTAGACGTTAAGTCACTCAACGCCGCTCAAAAAGAGCTACGTCGTGAACTTCATAAGACGATTGCAAAAGTG GGTGATGATATTGAACGTCGTCAGATGTTCAACACCGCTATCGCATCAGTGATGGAGCTAATGAACCGTCTACAAAAGGC GCCATCAGAAACCGAACAAGACAAGGCCCTAATGCAAGAAGCCTTGAATGCTGTTGTCCGTTTACTTTACCCAATCATTC CACATACGTGTTTCGTACTATGGAACGATCTTGGTAACCAAGGTGCAATTGAAGATGTACTTTGGCCTGAAGTTGACGAG TCTGCATTGGTTGAAGACAGCAAGCTAATCATCGTTCAAGTTAACGGTAAACTGCGCGCTAAGATCACCGTTGCAGCAGA TGCGAGCAAAGAAGAAGTTGAAACAGCAGGTATGGCCGAAGAAGGCGTGGTTAAACACACCGAAGGTAAAACTGTTCGTA AAGTTATCTACGTACCGGGCAAGTTGCTCAATATCGTGGCTAACTAA Protein sequence : MGGIAGNRLMQEQYTPSEIEAKVQQHWQDTKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRYQRLQGK NVLQPIGWDSFGLPAENAAIKNSTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYK KTSSVNWCPNDETVLANEQVIDGCCWRCDTTVEQKEIPQWFIKITEYAEELLNDLDQLDEWPEQVKTMQRNWIGRSEGIE MTFQVADSDQSFDIYTTRPDTVMGVTYVAIAAGHPLAEQAAINNPALAEFIEECKNADTTEAAMAAMEKKGVATGLNAIH PITGKEVPIWVGNFVLMNYGTGAVMSVPAHDQRDYEFAKKYSLNIEAVVKPADGEVDISEEAYTEKGVLFNSAEFDGLDF QAAFDAIDAKLTAEGKGKRQVNFRLRDWGVSRQRYWGAPIPMVTLADGTVIPTPEDQLPVILPEDVVMDGIQSPIKSDKE WAKTTVNGQEAFRETDTFDTFMESSWYYARYCSPHADQMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDSGL VNSDEPAKRLLTQGMVLADAYYYNNEKGARVWVAPSDVTVLETDDKGRTVKAVDSEGNELVYTGMSKMSKSKNNGIDPQE MVDKYGADTVRLFMMFAAPPELTLEWQESSVEGAHRFIKRLWKTAHDHIATGPTAELDVKSLNAAQKELRRELHKTIAKV GDDIERRQMFNTAIASVMELMNRLQKAPSETEQDKALMQEALNAVVRLLYPIIPHTCFVLWNDLGNQGAIEDVLWPEVDE SALVEDSKLIIVQVNGKLRAKITVAADASKEEVETAGMAEEGVVKHTEGKTVRKVIYVPGKLLNIVAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 1e-153 | 42 |
