Gene Information

Name : Shal_0328 (Shal_0328)
Accession : YP_001672563.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 390068 - 391588 bp
Length : 1521 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: shm:Shewmr7_3772 aldehyde dehydrogenase (NAD(+))

DNA sequence : 
ATGATCTATAGCAAGCCAGGAACCGCCGATGCCCTCATTAACTTCAAACCTCAATACCAAAATTTCATTGGTGGTGAATG
GGTTAAACCTGTTAATGACCTTTACTTTGACAACACTTCCCCCGTCGATGGCCAGGTCTTTTGCCAAGTGCCACGCTCAG
GCTCCGTTGATATTGAACTGGCACTCGATGCTGCCCATGAGGCTAAAGACAGTTGGGGCAAAACCTCTGTCACCGAACGC
GCAAACATCTTGCTGCGCATTGCAGATCGCATCGAGCAAAATATCGAGCCACTGGCTATCGCCGAGACTTGGGACAACGG
TAAAGCGGTACGGGAAACCTTAGTCGCCGACCTGCCGCTAGTGGTGGATCATTTTCGCTACTTTGCAGGCTGTATTCGCG
CCCAAGAAGGCAGCGCTGCCGATATCGATGCCAATACCGTGAGCTATCACTTTCCAGAGCCTCTAGGCGTGGTCGGTCAG
ATCATCCCATGGAACTTCCCACTATTGATGGCCGCGTGGAAGATTGCTCCAGCACTGGCCGCTGGTAACTGCATCGTGCT
AAAACCTGCCGAGCAGACGCCCGCCTCTATTTTAGTGCTACTCGAGCTTATTGAAGATCTACTACCAAAAGGCGTGCTTA
ACGTAGTTAACGGCTTTGGTACCGAAGCCGGTCAGGCGCTCGCCACCAGCAGCCGAATCAACAAGCTTGCATTTACAGGC
TCGACCCAAGTCGGTCAGCATATTTTAAAGTGCGCCGCCGAGTCGTTAATCCCGTCGACGGTAGAGCTAGGTGGTAAATC
GCCTAATATCTATTTTGCCGATGTGATGGATCATGAAGATGAATACCTCGATAAGGCGGTAGAAGGCATGCTACTGGCCT
TCTTTAATCAAGGTGAAGTCTGTACCTGCCCATCACGAGCGCTTATTCACGAGTCAATTTATGACAAGTTCATCGCTAAG
GTTATCCAGCGCGCTAAGACTATTAAGCAGAGCAACCCACTCGATACCGACACCCAAGTGGGCGCACAGGCCTCACAGGA
GCAGTTCGATAAGATATTAAGTTATCTGGACATAGGTAAAGATGAGGGCGCAGAGGTGCTGATTGGCGGCAACATTTGCA
AACTTGAAGGTGAGCAAAGCCAAGGCTTTTATATTACGCCGACTATCTTAAAGGGCACTAACGACATGCGCATCTTCCAA
GAGGAGATCTTCGGCCCGGTGATCTCGGTAACCACCTTTAAGGATGAAGCCGAGGCCTTAGCGATCGCTAACGATACCGA
ATACGGTCTAGGCGCTGGCGTATGGACTCGCGACATGAATACCGCCCAGCGCATGGGGCGTGGCATTCAAGCGGGTCGAG
TGTGGATAAACTGCTATCACGCCTACCCAGCTCATGCCGCCTTTGGTGGCTATAAGAAATCCGGCATTGGCCGTGAAACT
CACAAGATGATGCTAGACCACTATCAAAACACTAAGAACCTACTGATCAGCTACGATGCTAACCCTCTGGGCTTCTTCTA
A

Protein sequence : 
MIYSKPGTADALINFKPQYQNFIGGEWVKPVNDLYFDNTSPVDGQVFCQVPRSGSVDIELALDAAHEAKDSWGKTSVTER
ANILLRIADRIEQNIEPLAIAETWDNGKAVRETLVADLPLVVDHFRYFAGCIRAQEGSAADIDANTVSYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCIVLKPAEQTPASILVLLELIEDLLPKGVLNVVNGFGTEAGQALATSSRINKLAFTG
STQVGQHILKCAAESLIPSTVELGGKSPNIYFADVMDHEDEYLDKAVEGMLLAFFNQGEVCTCPSRALIHESIYDKFIAK
VIQRAKTIKQSNPLDTDTQVGAQASQEQFDKILSYLDIGKDEGAEVLIGGNICKLEGEQSQGFYITPTILKGTNDMRIFQ
EEIFGPVISVTTFKDEAEALAIANDTEYGLGAGVWTRDMNTAQRMGRGIQAGRVWINCYHAYPAHAAFGGYKKSGIGRET
HKMMLDHYQNTKNLLISYDANPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-171 72
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-180 71
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-180 71
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-180 71
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-179 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shal_0328 YP_001672563.1 aldehyde dehydrogenase VFG0082 Protein 9e-172 72