Gene Information

Name : Shal_3126 (Shal_3126)
Accession : YP_001675332.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 3813912 - 3814484 bp
Length : 573 bp
Strand : -
Note : PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shn:Shewana3_3618 4Fe-4S ferredoxin, iron-sulfur binding domain protein

DNA sequence :
ATGACTAAGCGTTATGTTCTCGTGCACGATGAAAACAAGTGCATTGGCTGCCAGGCGTGTAACGTGGCTTGCCGCAGTGA
AAACAATGTGCCTGAGTCGGTGACTCGCATTCAGGTCAGGATCGAGGGGCCTTACGGCAACTTCCCACATCTACATTTTA
AATATAATCGCGTCTCTTGTGAGCAGTGTGAAAATGCACCTTGCGTAAAGGTTTGCCCAACGGGTGCCGCTTACGTTAAT
GATGATGGCATTGTATCGATTAACGAAAAGAAGTGTGTAGGTTGTCTCTACTGCGTCGCCGCTTGTCCTTACAAGGTTCG
TTTCATTAACCCTGAAACACGCGTACCAGATAAGTGTGACTTCTGTAAAGAAACTCGCTTAGCTCGCGGTGAAGAGCCTG
CTTGTGTGACGGTTTGCCCAACTCAGGCGCTTGTGTTTGGTGATGCCAATGATATGAGCTCTGAAGTGCGTAAAGTGTTA
GATACAAAACCTCACTACCAACAAAAGGTAAACCTTGGCACAGAGCCTCGAGTCTACCGCATTCCTAGCCGTAAAGGAGG
GATCAAAGCATGA

Protein sequence :
MTKRYVLVHDENKCIGCQACNVACRSENNVPESVTRIQVRIEGPYGNFPHLHFKYNRVSCEQCENAPCVKVCPTGAAYVN
DDGIVSINEKKCVGCLYCVAACPYKVRFINPETRVPDKCDFCKETRLARGEEPACVTVCPTQALVFGDANDMSSEVRKVL
DTKPHYQQKVNLGTEPRVYRIPSRKGGIKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 5e-29 42
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 5e-29 42
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 4e-29 42
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 4e-29 42
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 3e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shal_3126 YP_001675332.1 4Fe-4S ferredoxin VFG0486 Protein 1e-29 42