Gene Information

Name : Shal_2747 (Shal_2747)
Accession : YP_001674959.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3333843 - 3334577 bp
Length : 735 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ppr:PBPRB1562 hypothetical 3-oxoacyl-(acyl carrier protein) reductase

DNA sequence : 
ATGCTAAATAACAAAATCTGTATAGTCACTGGCGGCGCACAAGGTATTGGTCGATGCATCGTTGAAACGTTTGCTCAGCA
AGGTGCGCTTAAAGTTTACGCTTGCGACATGAATATAGAGGCGATGCGAGACCTTGAAGAACAATACAGCAATGTGTCAG
CTAAAGAACTTAATGTCTGCGATCGCAAGGGCATTCAAGCACTCATTGAGACGCTAAAAGCCGAACATGGCAAGATTGAC
GTTTTAGTTAATAATGCTGGAATTACCCGTGATAATTTGCTTGATAGAATGAGTGAAGATGACTGGGACATGGTCATCAA
CGTTAACCTTAAAGGTGTGTTCAATATGACCCAAGCAGTAGCACCATTAATGATTGAAAATGGTGTAGGCTCGATTATTA
CGATGTCTTCTGTTGTTGGAACTGATGGAAATGTTGGACAAACAAATTATGCCGCAACTAAAGGCGGCGTCATCACCATG
ACCAAGGGTTGGGCTAAAGAGTTTTCTCGTAAAGGGGCGCAAGTTCGCGCCAATTGTGTTGCTCCAGGATTTATTGAAAC
ACCAATGACGATTGAGTTACCAGAAAAAGTACTTAACTTCATGAAAGGTAAAACACCACTTGGCCGTATGGGTAAGCCTG
AAGATATCGCCAATGGTGTACTTTTTCTTGCCAGTGACAACTCCAACTTTATCACCGGACAGACCCTTAAAATTGATGGT
GGCCTTGTAATATAA

Protein sequence : 
MLNNKICIVTGGAQGIGRCIVETFAQQGALKVYACDMNIEAMRDLEEQYSNVSAKELNVCDRKGIQALIETLKAEHGKID
VLVNNAGITRDNLLDRMSEDDWDMVINVNLKGVFNMTQAVAPLMIENGVGSIITMSSVVGTDGNVGQTNYAATKGGVITM
TKGWAKEFSRKGAQVRANCVAPGFIETPMTIELPEKVLNFMKGKTPLGRMGKPEDIANGVLFLASDNSNFITGQTLKIDG
GLVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 4e-32 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 4e-30 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-30 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 8e-31 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 4e-30 41