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Name : Shal_0242 (Shal_0242) Accession : YP_001672477.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 289982 - 292339 bp Length : 2358 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: slo:Shew_3634 RNA binding S1 domain protein DNA sequence : ATGCAAAATATTGCACAGCTCATCGCTGAGGAACTCAATGTTCGTCAGCAACAAGTTATCGATACCATTTCATTACTCGA TGACGGCGCAACCGTGCCGTTTATTGCCCGTTACCGTAAAGAGGCCACTGGTGGCTTAGATGACGTTCAACTGCGTACCC TATTTAGTCGTTTGGGCTATTTACGGGATCTCAATGATCGTCGTAACGTAATTTTGTCGAGTATTGAAGCACAGAGTAAG TTAACACCTGAGCTGAAAGCAGCGATTATTGCTGCCGATAGTAAGACGCGTCTAGAAGATCTCTACCTTCCATATAAGCC AAAGCGTCGCACTAAGGGTCTTATTGCGATTGAAGCGGGCATCGAACCTTTAGCCGATTACCTGTTAGCTAATCGCCAAG TCGATTGCGAAGCGGCTGCTAGCGAATATATCAACGCTGCCGCAGGTTTTGCCGACGCCAAGGCTGTGCTCGATGGCGCA CGCTTTATCTTGATGGAGCGCTTTGCTGAAGATGCAGAGCTGTTGCAAAAAATTCGTACTCAAGTTGAGCAAAATGCCGT ACTTGAAAGCACTATGGTTAAGGGCAAAGAGAAAGAAGGCGCAAAGTTTAGAGATTACTTCGAGCATTCTGAAAAGCTGA CCAAAGTGCCATCACACCGTGCGCTAGCGATGCTGCGTGGCCGCAATGAAGGCATGTTGAGCCTTAATATTAATGCCGAC CCGCATCAAGAGCCTAAGCAAGCGAGCTATTGTGAAGTGATCATTATTGAGCATTTTAAGCTGGGGCTTACAGATACTGG CGTTGATGCTTGGCTAAAAACAGTGGTAGCGGCGACGTGGAAAGTTAAGATTGCCCTACAGATGGAAACCGAGTTTCTTG GCCGTATGCGTGATAGCGCCGAACAAGAAGCGATTAAGGTTTTTGCCCGTAACTTAGGCGATCTACTGATGGCGGCACCA GCGGGTGCTAAAGCGACCTTAGGTTTAGATCCTGGTCTTCGCTCTGGCGTTAAAGTAGCGATTGTCAACGACACGGGTAA GCTGGTGGCGCACACGACTATTTTCCCACATGCTCCGCAAAATCAGTGGGATAAGTCGGTAAGAACCTTAAGTAACCTAG TTAAGATGCACAAGGTTGAGTTGATTGCGATTGGTAACGGCACCGCATCGCGTGAAACCGATAAGCTAGCTGCAGACTTA ATCAGCCAAGTAAAAGCTGACTTGCCAACATTGACCAAAATTATGGTCAGCGAAGCGGGTGCATCTGTCTATTCAGCCTC TGAGCTAGCCTCGGAAGAGTTCCCAGATATCGATGTATCTATTCGCGGCGCGGTGTCTATTGCACGCCGCCTACAAGATC CGTTGGCAGAGCTTGTTAAGATTGAGCCTAAAGCGATTGGTGTCGGCCAATATCAGCACGATGTGAGTCAGAGTCAGCTA TCAAGTTCACTAGAAGCGGTTGTCGAAGACTGTGTGAACGGCGTTGGTGTTGACGTTAATATGGCGTCAGCTGCACTGCT TGCACAGGTGGCGGGTCTAAATAAAACCTTAGCGCGTAATATCGTGACTCATCGTGACGAGCAAGGTCGCTTTAACAACC GTAAAGCACTGCTTAAAGTCGCGCGCCTTGGGCCTAAAGCCTATGAGCAAGCAGCGGGTTTCCTGCGTATTAACGACGGT GATAACCCACTCGATAGCTCTTCGGTTCACCCTGAAGCCTACTCATTAGTCGAGTCTATTGCTGCGGATAAAGCTGTCTC TGTTGCTGAATTGGTGGGTAACTCAGAACTGATTAAGTTACTGGAAGCAAAAGACTTCATTACCAACGAGTTTGGTCTAC CTACGGTAACCGATATTCTGGCTGAGCTTGATAAGCCTGGTCGAGATCCTCGTGGTGAGTTTAAGACTGCGACCTTTAAA GAGGGCGTAGAAGAGATTAAAGATCTGCAGCTAGATATGATCTTAGAAGGTGTGGTGACTAATGTGACCAACTTTGGCGC CTTTGTTGATGTGGGCGTTCATCAAGATGGCTTAGTGCATATCTCTTCGATGACCGACAAGTTTATCGACGATCCACATA AGGTGGTTAAAGCCGGCGATATCGTTAAAGTGAAGGTGATGGAAGTGGATGCCGAGCGTCGCCGTATTGCGCTAAGTATG CGTCTTGATGATAAGGCTGGCGATGCCCATAAGAGTGCGCCACGTCCTACTTACAACAAAGCAAGCCCGAATAAGGGCGC TGCGAATAAAGGCACTAATCAGCAACGCGGCCAACAGAAGAGCCATAAGCCTAAGCAGCAAGCCAATGCTGCCATGGGTA ACGCTTTTGCCGATGCCTTCGCGAAATTGAAGAAGTAA Protein sequence : MQNIAQLIAEELNVRQQQVIDTISLLDDGATVPFIARYRKEATGGLDDVQLRTLFSRLGYLRDLNDRRNVILSSIEAQSK LTPELKAAIIAADSKTRLEDLYLPYKPKRRTKGLIAIEAGIEPLADYLLANRQVDCEAAASEYINAAAGFADAKAVLDGA RFILMERFAEDAELLQKIRTQVEQNAVLESTMVKGKEKEGAKFRDYFEHSEKLTKVPSHRALAMLRGRNEGMLSLNINAD PHQEPKQASYCEVIIIEHFKLGLTDTGVDAWLKTVVAATWKVKIALQMETEFLGRMRDSAEQEAIKVFARNLGDLLMAAP AGAKATLGLDPGLRSGVKVAIVNDTGKLVAHTTIFPHAPQNQWDKSVRTLSNLVKMHKVELIAIGNGTASRETDKLAADL ISQVKADLPTLTKIMVSEAGASVYSASELASEEFPDIDVSIRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVSQSQL SSSLEAVVEDCVNGVGVDVNMASAALLAQVAGLNKTLARNIVTHRDEQGRFNNRKALLKVARLGPKAYEQAAGFLRINDG DNPLDSSSVHPEAYSLVESIAADKAVSVAELVGNSELIKLLEAKDFITNEFGLPTVTDILAELDKPGRDPRGEFKTATFK EGVEEIKDLQLDMILEGVVTNVTNFGAFVDVGVHQDGLVHISSMTDKFIDDPHKVVKAGDIVKVKVMEVDAERRRIALSM RLDDKAGDAHKSAPRPTYNKASPNKGAANKGTNQQRGQQKSHKPKQQANAAMGNAFADAFAKLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
