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Name : Shal_2316 (Shal_2316) Accession : YP_001674534.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 2800840 - 2801577 bp Length : 738 bp Strand : + Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGAATGTAACCTTATTAATCCCTGCTCGTTACGGCTCTAGCCGTTTCCCTGGCAAGCCATTGGCGCCTATTAACGGCAA GCCAATGATCCAGCATGTCTACGAGCGCGCTGCTTTAGCAAAAGGGCTTAAAGACATCTATGTCGCCACCGATGATGAGC GCATTAAAAACGCCGTAGAAGGTTTTGGTGGCAAAGTTGTTATGACAGGTGCAGATGCCGCATCGGGTACTGACCGTATC GACGATGCAATCACCCAACTAGGGCTAGCTGATGACGATCTTGTGATTAACTTGCAAGGCGATCAACCCCTTATCGACCC CATCTCTATTGAACAACTTGTTAGCCTTTGTGAGCGCCACCCAGGCGAATTTGATATGGCGACATTAGGTGTTGAAATTA GAGACGAAGCTCAAATTAATGATCCAAACCATGTGAAAATGGTATTCGATAACAATTTTAATGCCCTCTATTTTTCTCGT GCAACGATTCCCTTTGGTCGAGAGAGCAGCGATTACCCGGTATACAAGCATCTCGGTATTTACGCATATACGCGTAAATT TATTCAGACTTTCGCTAAGCTGCCACTTGGCCGCCTAGAAGATCTCGAAAAACTTGAACAGCTTAGAGCACTCGAATACG GCTACAAAATCAAAGTTGCCATCAGCGCATTCGATTCACCGGAAGTGGATACACCGGAAGATATCCGTATCTGCGAAGCC AGACTTGCCGTTGACTAA Protein sequence : MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLKDIYVATDDERIKNAVEGFGGKVVMTGADAASGTDRI DDAITQLGLADDDLVINLQGDQPLIDPISIEQLVSLCERHPGEFDMATLGVEIRDEAQINDPNHVKMVFDNNFNALYFSR ATIPFGRESSDYPVYKHLGIYAYTRKFIQTFAKLPLGRLEDLEKLEQLRALEYGYKIKVAISAFDSPEVDTPEDIRICEA RLAVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-42 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-42 | 45 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-42 | 45 |
