Gene Information

Name : Shal_1956 (Shal_1956)
Accession : YP_001674180.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : sulfatase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 2350361 - 2351980 bp
Length : 1620 bp
Strand : +
Note : PFAM: sulfatase; protein of unknown function DUF1705; KEGG: she:Shewmr4_2103 sulfatase

DNA sequence :
GTGTTAGCACGTCTTAAAAATTTAAATAGCATTCAATTTACCGTCATACTTTCGATTTACTATGTATGCGTGTTTAATAT
TCCTCTTTTTCAAATAATCAAACAGGGCGTAGATAAACAAGCCGATGTCAATATGGCATTTATTGCCAGTATGCCTTTGT
TTCTGTTTTTCGCTCTGTCATTTTTATTTAGCCTTTTTAGTGTTAAGTATCTAGCAAAGCCATTTTTTATTATTTTGACG
TTGATGTCGTCGAGTGTCTTTTTTGCGGCATTTCAATATGGTGTGGTATTTGACTACGGCATGATTGAAAACACCTTTCA
GACCAATCAATCAGAAGCGACAACCTACCTTAATTGGGCGTCAGTTGTTAACTTCGTGGTGACAGGCATTATCCCCTCAC
TGTTTATCTATAAAGCTAACATTCAGTACAAGCCCATAACGAAAGAACTGCTGCACAAGGCTTTATTTATGCTGTCTATG
CTTGCAGGTATCGTCGTGATTGCTATGTTCTATTATCAAAATTACGTCGCATTTGGTCGAAATAACGACATCATGAAGCG
TTATATTATCCCAACATATTTTATTGGTTCAACTGTTAAGTATCTAAAAATTAACTACTTACAAGAGCCTTTAGCGTATA
AACAGATTGGTTTGGACGCCAAAAACACCACAGACAAAGCCAAGCCTAATTTAGTCATTTTGGTGGTAGGAGAAACGGCT
AGGGCGGCCAATTATGCATATTATGGTTACGACAGACCGACCAATGCGCATACTAAAGAGCAGGGGATAGTGGTGTTTAA
AGACACCCATTCATGTGGTACTGCTACAGCCGTCTCTTTGCCTTGCATGTTTTCTAGAATGGATCGTGATAATTATAATT
CGCGTCGAGAAAGAGCCCAAGACAGCGCTATCGATGTGTTAAACCATGCAGGGATCCAACTTGAATGGCTCGACAATGAC
AGTGGCTGTAAAGGTGTTTGCCAGAATATTGAGAGTATCACAATAGATCATAATAGCGATCCTAAGCTGTGTAACGGTGA
GTATTGTTACGATCAAGTGTTGCTTAATGAGTTAGGTAAGCGGCTTAAAACCATTAAAGATGAAGACACATTATTAGTGC
TACACATCATTGGTTCTCATGGGCCGACCTATTATCTACGTTATCCGGAGAAGTATCGTCAGTTTGTGCCTGACTGCCAA
CGTAGCGATATTCAAAACTGCAGCCATGAAGAGTTGGTTAACACTTACGATAATACTATTTTATATACCGACTTTATCCT
CTCACAGGTCGTTAATAAGCTAAAAGCAACAAGCGCGCAATTCGATACTGCAATGCTCTATATATCAGATCATGGTGAGT
CATTAGGCGAAAAAGGCATGTATCTTCATGGTACGCCTTATTCATTTGCGCCCGATGAGCAAACAAAAGTGCCTTTCTTG
GGCTGGTTCTCAAGCGGTTTTGCGGAGCAAAATCACTTAAACCTTGCTTGCTTAGCAAAAGAAGCTAACAAGGGCGGTTT
CTCTCACGACAATTTATTCGATAGCTTACTTGGTTTGATGAATGTCCGTAGTGAGGTTTATCGGCCAAAATCTGATATTT
TCGCGAGTTGTCGAAAATAA

Protein sequence :
MLARLKNLNSIQFTVILSIYYVCVFNIPLFQIIKQGVDKQADVNMAFIASMPLFLFFALSFLFSLFSVKYLAKPFFIILT
LMSSSVFFAAFQYGVVFDYGMIENTFQTNQSEATTYLNWASVVNFVVTGIIPSLFIYKANIQYKPITKELLHKALFMLSM
LAGIVVIAMFYYQNYVAFGRNNDIMKRYIIPTYFIGSTVKYLKINYLQEPLAYKQIGLDAKNTTDKAKPNLVILVVGETA
RAANYAYYGYDRPTNAHTKEQGIVVFKDTHSCGTATAVSLPCMFSRMDRDNYNSRRERAQDSAIDVLNHAGIQLEWLDND
SGCKGVCQNIESITIDHNSDPKLCNGEYCYDQVLLNELGKRLKTIKDEDTLLVLHIIGSHGPTYYLRYPEKYRQFVPDCQ
RSDIQNCSHEELVNTYDNTILYTDFILSQVVNKLKATSAQFDTAMLYISDHGESLGEKGMYLHGTPYSFAPDEQTKVPFL
GWFSSGFAEQNHLNLACLAKEANKGGFSHDNLFDSLLGLMNVRSEVYRPKSDIFASCRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 6e-110 46
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 6e-110 46