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Name : Shal_1900 (Shal_1900) Accession : YP_001674124.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2282952 - 2284940 bp Length : 1989 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCAAATCGTCGCGAAACCCGAGCTCAAGCTCAACAGTTTATTGATAACTTAAAGCCACTGCAGCACCCCAATTCTGA GAAAATTTACCTACAAGGCAGTCGAGCCGATCTAAAAGTGGGTATGCGTCAAATACACCAAGCAGATACCTTGATTGGTG GCAATGAAACTAATCCTGTTTTTGAAGCGAATCCACCGCTAAAGGTTTATGACTGCGCCGGTGCTTATTCCGATCCCGAT GCTAATATCGATGTGCGCAAAGGGCTTGAAAAATTCCGTGAACACTGGATAGAAGAGCGCGGCGATACCGAGCAACTTGC CGGTGTGAGCTCGGGCTTTACCCAACAGCGATTAGCCGATGATGGCCTAGATCATTTACGCTTCGAGTCTTTATTGCCGC CACGCCGCGCAAAAACGGCTAAACGCGTGACCCAGTTACACTACGCAAGGCAGGGTATTATCACTCCAGAGATGGAGTAT ATTGCCATTCGTGAAAACATGGCGCTGGCAGAAGTTAATGACCCCATTTTAACTCAAAAAGATAAAGGCGAAAGTTTTGG CGCAGTGATTGGCGAGCCGATAACGCCTGAATTTGTCAGGCAAGAAGTTGCCCGTGGCCGCGCCATTATCCCATTAAATA TTAACCATCCTGAAGCTGAACCGATGATTATAGGGCGTAACTTTTTGGTTAAAGTGAATGCCAATATTGGTAATTCCGCC GTGACATCGTCAATCGAAGAGGAAGTCGAAAAGCTGGTATGGTCGACTCGTTGGGGCGCCGATACCGTAATGGATCTGTC TACCGGACGTTATATTCATGAAACCCGCGAGTGGATTATTCGTAACTCGCCAGTGCCAATCGGTACGGTGCCTATTTACC AAGCGCTTGAGAAAGTTAATGGCATTGCTGAAGATCTTAACTGGGAAACCTTTCGCGATACCTTGATAGAGCAAGCCGAG CAGGGCGTTGATTACTTCACCATTCATGCCGGTGTGCTACTACGTTATGTGCCAATGACGGCAAAACGCTTAACTGGCAT CGTTTCTCGTGGCGGTTCAATCATGGCCAAATGGTGCTTGTCGCACCATAAAGAAAACTTCCTCTATGAACATTTTAGAG ATATTTGCGAGATCTGCGCCGCATACGATGTTTCATTATCGCTGGGTGACGGCATGCGTCCTGGTTCAATTGCCGATGCG AACGACGAAGCGCAATTTTCGGAGTTAACCACCTTAGGCGAGCTGGTTAAAATCGCTTGGCAATATGATGTTCAGACCAT TATCGAAGGTCCCGGTCATATTCCAATGAATCTCATCAAAGAGAATATGGATAAGCAGCTTGAGCTGTGTGATGAAGCGC CGTTTTACACCTTAGGCCCGCAAACGACCGATATTGCACCGGGTTACGATCATTTCACTTCAGGCATTGGCGCGGCAATG ATCGCTTGGTATGGCTGCGCCATGCTGTGTTACGTCACGCCAAAAGAGCATCTTGGTCTGCCGAACAAAGAAGATGTAAA GCAAGGACTCATTACCTACAAGATTGCTGCTCATGCAGGTGATGTGGCGAAGGGCCATCCTAGCGCGCAAATCCGTGATA ACGCACTGTCTAAGGCGCGTTTTGAGTTCCGTTGGGAAGATCAGTATAACTTGGGTTTAGACCCTGATACGGCGCGGGCC TATCATGATGAATCTTTACCTCAAGAGTCTGCCAAAGTGGCACATTTTTGCTCCATGTGTGGTCCTAAATTCTGTTCAAT GAAGATCACCCAAGAGGTACGAGATTATGCCGCGGCGAAAGAGCGTGACGAGCTAGCAAACAACATCGATATCAAATCCG ATGCCGAGTATCAATCATGCGCAGATAGCGAAACGACGTCAGAGCGAGAGCTGGGCATGGCGCAGATGTCAGCCGAGTTT AAGGCTAAGGGCGCAGAGCTCTATCATGAAGCCGCCGATAAACAGCGTGATGCGGTATTAGAGGACTAG Protein sequence : MSNRRETRAQAQQFIDNLKPLQHPNSEKIYLQGSRADLKVGMRQIHQADTLIGGNETNPVFEANPPLKVYDCAGAYSDPD ANIDVRKGLEKFREHWIEERGDTEQLAGVSSGFTQQRLADDGLDHLRFESLLPPRRAKTAKRVTQLHYARQGIITPEMEY IAIRENMALAEVNDPILTQKDKGESFGAVIGEPITPEFVRQEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSA VTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGIAEDLNWETFRDTLIEQAE QGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKENFLYEHFRDICEICAAYDVSLSLGDGMRPGSIADA NDEAQFSELTTLGELVKIAWQYDVQTIIEGPGHIPMNLIKENMDKQLELCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAM IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAGDVAKGHPSAQIRDNALSKARFEFRWEDQYNLGLDPDTARA YHDESLPQESAKVAHFCSMCGPKFCSMKITQEVRDYAAAKERDELANNIDIKSDAEYQSCADSETTSERELGMAQMSAEF KAKGAELYHEAADKQRDAVLED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
