Gene Information

Name : Shal_1777 (Shal_1777)
Accession : YP_001674001.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2128606 - 2129352 bp
Length : 747 bp
Strand : +
Note : TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: shw:Sputw3181_2440 3-oxoacyl-(acyl-carrier-protein) reductase

DNA sequence : 
ATGAGTATAAGTTTTGACCTGACTGGTAAAGTTGCTTTAGTTACTGGCGCTAGTCGTGGAATTGGGCGTGCGGTCGCAGA
AACTCTCGTTTCAGCGGGCGCGGTTGTTATCGGTACCGCAACCAGTGAGCGCGGCGCAGAAGCAATTCAAGCCTATTTAG
GTGATAAAGGCCACGGCCTTGTTTTAAACGTGACAGATGCTGATTCAGTAAAGGCCTTGTTTGAAACGATCAAAGCAACT
GCTGGTGATGTTGATATTTTAGTCAACAACGCTGGGATCACGCGTGACAATTTGTTAATGCGAATGAAAGATGATGAATG
GCAAGATATCATTGATACTAACCTGACATCTATATTCCGCACATCAAAAGCGGTGATGAGACCAATGATGAAAAAGCGTC
ATGGACGCATTATCAATATTGGCTCGGTGGTAGGCACCATGGGCAATGCAGGACAGACTAACTATTCTGCAGCTAAAGCT
GGTTTGATTGGATTTACAAAATCTCTTGCAAGAGAGGTTGCATCTCGCCAAATTACAGTTAATGCTATTGCTCCTGGATT
TATCCAGACAGATATGACGGATGAGCTGACGGAAGACCAGCAACAAGCTATTATGTCTCAGGTGCCAATGGAGAGACTTG
GTCAGGCGCAGGAAATTGCTCACGCAGTCCTCTTTTTAGCGTCAGACTCTGCTGCTTACATCACGGGAGAAACTCTTCAC
GTGAATGGTGGCATGTACATGGTTTAA

Protein sequence : 
MSISFDLTGKVALVTGASRGIGRAVAETLVSAGAVVIGTATSERGAEAIQAYLGDKGHGLVLNVTDADSVKALFETIKAT
AGDVDILVNNAGITRDNLLMRMKDDEWQDIIDTNLTSIFRTSKAVMRPMMKKRHGRIINIGSVVGTMGNAGQTNYSAAKA
GLIGFTKSLAREVASRQITVNAIAPGFIQTDMTDELTEDQQQAIMSQVPMERLGQAQEIAHAVLFLASDSAAYITGETLH
VNGGMYMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-34 44
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 44
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-34 44
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-34 44
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-35 44