Name : Shal_1634 (Shal_1634) Accession : YP_001673859.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : integron integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1962081 - 1963043 bp Length : 963 bp Strand : - Note : TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: sbm:Shew185_1682 integron integrase DNA sequence : ATGGCAGCTATAAAAAGTCCTTTTCTGACTCAAGTTCGTGAACATATGCGTATGCGCGGTTACAGTATCAAAACAGAAAA AGCATACTTGTACTGGATTAAAGCCTTTATCAACTTCCAGCAAAAGCGTCACCCAGAAACAATGGGACAAGCTGAAGTGA CACAATTCCTCAGTTTTCTGGCTAACTCACGTAATGTTGCGATTAATACACAGAAAGTGGCGCTCAATGCTCTTGTGTAC CTTTATCATAAGCATCTAAAGCAAGATCTAGGTGACCTGGGGTTTAGATATGCCACCAAACAAAGGCAGTTACCTATTGT GCTATCAACCGAAGAAGTTTCTGAGGTTCTTTGTCAGCTTAATGGGCGAGACCAACTTATTGTCCAGTTACTATATGGCA GCGGACTGCGGGTTTCAGAATGTTTAAGGTTACGTATTCAAGATATCGATCTAGCACGCTGCTCACTCACTGTCAGAAAT GGCAAAGGCCATAAAGACAGACAAACCATTCTCAGTCAAAAATGTGCAATCAAACTACCTGCTTATATCGATGCTGCGCG TGCTATTCAGATTAAGGACAATACCTATTGTATAGGGCCATCTTTACCCAATGCGCTAGAGCGTAAGTACCCCAATGCAT TTAGGCAAGCTGGCTGGATGTTTGTTTTTCCATCAACCACCACAAGTGATAATCCATACACTAAGACTCACTGTAGACAC CATTTACATCAGAGTGTCATTCGAAAAGCACTTGCAGCTGCGGTGCGAAAAACCCATATCATCAAACGTGTCACTTGCCA TACCTTCAGGCACAGCTTTGCCACCCATTTACTTCAAGCTGGGCGGGACATAAGAACTATTCAGGAGCTACTGGGCCACA ATGATGTCAATACCACTCAAATCTACACTCACGTGCTTGGCCAACATTACGCAGGAACGGTGAGTCCGCTAGATAGTCTG TAA Protein sequence : MAAIKSPFLTQVREHMRMRGYSIKTEKAYLYWIKAFINFQQKRHPETMGQAEVTQFLSFLANSRNVAINTQKVALNALVY LYHKHLKQDLGDLGFRYATKQRQLPIVLSTEEVSEVLCQLNGRDQLIVQLLYGSGLRVSECLRLRIQDIDLARCSLTVRN GKGHKDRQTILSQKCAIKLPAYIDAARAIQIKDNTYCIGPSLPNALERKYPNAFRQAGWMFVFPSTTTSDNPYTKTHCRH HLHQSVIRKALAAAVRKTHIIKRVTCHTFRHSFATHLLQAGRDIRTIQELLGHNDVNTTQIYTHVLGQHYAGTVSPLDSL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
intI1 | AGK06930.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-60 | 47 |
intI1 | ACY75520.1 | integrase | Not tested | Tn6060 | Protein | 2e-60 | 47 |
intI1 | YP_005797145.1 | integrase | Not tested | AbaR4e | Protein | 1e-60 | 47 |
intI1 | AGK06967.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-60 | 47 |
intI1 | ACY75535.1 | integrase | Not tested | Tn6060 | Protein | 2e-60 | 47 |
intI1 | ACN81019.1 | IntI1 integrase | Not tested | AbaR5 | Protein | 1e-60 | 47 |
intI1 | AGK07013.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-60 | 47 |
intI1 | AGF34986.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-60 | 47 |
EC042_4092 | YP_006098375.1 | integrase | Not tested | Tn2411 | Protein | 9e-61 | 47 |
intI1 | AGK07071.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-60 | 47 |
intI1 | AGF35026.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-60 | 47 |
intI1 | AFV53119.1 | IntI1 integrase | Not tested | AbGRI2-1 | Protein | 1e-60 | 47 |
intI1 | CAB46685.1 | DNA integrase | Not tested | Not named | Protein | 2e-60 | 47 |
unnamed | AAL08437.1 | Tn21 integrase IntI1 | Not tested | SRL | Protein | 3e-60 | 47 |
intI1 | AGK36642.1 | IntI1 integrase | Not tested | AbaR26 | Protein | 1e-60 | 47 |
intI1 | ABB48427.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-60 | 47 |
intI1 | AAK02045.1 | integrase | Not tested | SGI1 | Protein | 2e-60 | 47 |
unnamed | ACF06155.1 | class 1 integrase | Not tested | Tn5036-like | Protein | 7e-61 | 47 |
intI | CAJ77082.1 | Integrase | Not tested | AbaR1 | Protein | 1e-60 | 47 |
intI1 | ABZ01842.1 | IntI1 | Not tested | SGI2 | Protein | 2e-60 | 47 |
intI | YP_001844881.1 | integrase | Not tested | AbaR20 | Protein | 1e-60 | 47 |
intI1 | AGK07098.1 | IntI1 integrase | Not tested | SGI1 | Protein | 7e-61 | 47 |
intI1 | AGF35060.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-60 | 47 |
intI | CAJ77028.1 | Integrase | Not tested | AbaR1 | Protein | 2e-60 | 47 |
intI1 | YP_005797130.1 | integrase | Not tested | AbaR4e | Protein | 1e-60 | 47 |
intI1 | AFL65913.1 | class 1 integrase | Not tested | SGI1-J6 | Protein | 2e-42 | 46 |
int1 | YP_005160012.1 | integrase | Not tested | Not named | Protein | 2e-48 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Shal_1634 | YP_001673859.1 | integron integrase | VFG1028 | Protein | 2e-60 | 47 |