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Name : Shal_0150 (Shal_0150) Accession : YP_001672385.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Resistance Product : Fis family two component sigma54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 168374 - 169744 bp Length : 1371 bp Strand : + Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: slo:Shew_3682 two component, sigma54 specific, transcri DNA sequence : ATGAATAATATGAAGCCACTTCCTTCTGCTGTATCTGTATTGATCGTCGATGATGAACCGGGCATGCGCAGCTTTCTAAA GAAAGCGTTAGCGAAGAAATTTGCCTTAGTTGAAACCGCTTCGAGTGTTGAAGATGCGGAGCAACTGCGTTCACGCTGCC ATTTTGATCTGCTAATTGTCGATATTCGTCTGCCTGGACGCTCGGGGATCGAGTGGCATGAGGCGCTTAACGATCAAGAG AGACGCTCTGATATTATCTTTATGACCGGCTATGCCGATATGGATGTGGCGATAAAGGCATTACGTGCTGGCGCATCTGA TTTCATTATGAAGCCGTTCCACCTTGAACAGATGATGAAGGCCGTTGACCGCTGTATCGAACGCCGCTTACTCAAGCGTG AGAACTTGATGCTGCGCAGAGAAGTGTCTTTCAATCAGTCTTCGACCATTATTGGTCAAAGCGATGCGATGACAGAAGTG AAGCATGTTATCGAACGTGTGGCGCCGACCAATGCAGTGGTCTTGATCGAGGGTGAATCAGGCACTGGTAAAGAGTTGGT GGCCAGACAGCTGCATATTCTCAGTGGCCGCCAAGGTCCATTTGTCCCGGTTAACTGTGGCGCTATTGCCCCTGAACTGT TAGAGAGTGAGCTATTTGGGCACTCTGCAGGCGCTTTTACTGGTGCGAAAGGTAACAGAGAAGGCTTATTTAGCTTTGCC TCTGGCGGGACTATCTTCCTCGACGAAATTGGTGAAATGCCGCTTAAGATGCAAACGGCATTATTGCGTGTGCTCGAGCA GCGTACTATTCGCCCTGTCGGCAGTGAGAAAGAGATTAACATCGATGTGCGCGTATTAGCGGCAACCAATCGTAAGCTTT CAGAAGAAGTGGAAGCGGGTAACTTCAGACGTGACTTGTATTATCGCCTCAACGTGCTCGATATCGTGATCCCGCCTCTG CGTGAGCGCCCAGAAGATATTGTAGAGCTAACTCATCACTTTACCTGCCAGTTAGCTGCCGAATTGGGTGTAAAAGAGGT GGTTTGGAGTCATGAAGATCTATTAAAGCTGCAACAACACGAATGGCCAGGTAATATTCGTGAGCTGCGAAATATGATTG AACGCTGTATCCTACTGGGAAAACCACCTGCCGAGTATTGGAAAGCACAACCTAAGGCTGAAACGTTGGGCGAATCGGGT TACCCACTGCAATGGGCGCTTAAAGATGTTGAGCGTGACCATGTGACTCGCGTTGTTGACGTGCATGGTGGTAATAAATC TGCGGCGGCAAGGGATCTAGGAGTATCACGTAAAACCCTAGATCGTAAGTATAAAGAGTGGTTTGGCGGCGAAGCCGACA AAGAAGAATAA Protein sequence : MNNMKPLPSAVSVLIVDDEPGMRSFLKKALAKKFALVETASSVEDAEQLRSRCHFDLLIVDIRLPGRSGIEWHEALNDQE RRSDIIFMTGYADMDVAIKALRAGASDFIMKPFHLEQMMKAVDRCIERRLLKRENLMLRREVSFNQSSTIIGQSDAMTEV KHVIERVAPTNAVVLIEGESGTGKELVARQLHILSGRQGPFVPVNCGAIAPELLESELFGHSAGAFTGAKGNREGLFSFA SGGTIFLDEIGEMPLKMQTALLRVLEQRTIRPVGSEKEINIDVRVLAATNRKLSEEVEAGNFRRDLYYRLNVLDIVIPPL RERPEDIVELTHHFTCQLAAELGVKEVVWSHEDLLKLQQHEWPGNIRELRNMIERCILLGKPPAEYWKAQPKAETLGESG YPLQWALKDVERDHVTRVVDVHGGNKSAAARDLGVSRKTLDRKYKEWFGGEADKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 3e-63 | 43 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 3e-63 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shal_0150 | YP_001672385.1 | Fis family two component sigma54 specific transcriptional regulator | BAC0089 | Protein | 1e-65 | 45 |
