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Name : Shal_1502 (Shal_1502) Accession : YP_001673727.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1807480 - 1808490 bp Length : 1011 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: shn:Shewana3_4089 NAD-dependent epimerase/dehydratase DNA sequence : ATGAAGTATTTAGTAACAGGTGCGGCAGGTTTTATTGGCTCGAAGGTTAGTGAGCGTTTATGTGCTGCAGGTCATGAAGT GGTTGGTATCGATAATATTAATGATTATTACGATGTTAATTTGAAACTGGACCGCCTTAAAAATTTGCAGTCTCAGACTC TTTTTTCATTTAAGAAGTTAGATTTAGCTGATAGAGAAGGCATTGCTACTTTGTTCGCTGAAGAGGGCTTTGACAGAGTG ATCCACTTGGCGGCACAAGCTGGGGTACGTTACTCAATCGATAACCCAATGGCTTATGCCGACAGTAACTTAGTGGGTCA TTTGACTATTTTGGAAGGCTGTCGTCATCATAAGATCCAGCATCTGGTATATGCATCTTCAAGCTCTGTTTATGGGCTGA ACTCTAAAATGCCTTTCTCAACTGACGACAGCGTCGATCATCCGATCTCTTTATATGCTGCAACCAAGAAAGCCAATGAG TTGATGTCGCACACATACTCTCACCTTTATGGTGTGCCAACGACTGGCCTGCGCTTCTTTACCGTTTATGGTCCTTGGAG TCGTCCTGATATGGCACTACTCAAGTTCACTAATAAGATAGTGAAGGGGGAAGCGATTGATGTGTACAACCACGGTAATT TGAGCCGCGATTTCACCTATATCGATGATATCGTTGAAGGCATTATTCGTATCCAAGATAGTGTTCCAGTTGCTAACCCT GAGTGGAACGCTGCAGAGGCAACTCCTGCAACGAGCTCTGCACCTTATCGAGTATTTAATATCGGTAATGGCAGTCCGGT TAAGTTGATGGATTACATCTCAGCGCTTGAAAAGTCATTAGGTATCGAAGCCATTAAAAACATGATGGATATGCAGCCTG GTGACGTACATTCAACATGGGCCGATACCGAAGATTTATTCAAAACTGTAGGTTACAAGCCACAAACGAGCGTCGAAGAG GGCGTACAGAAGTTTGTTGAGTGGTATAAAGAGTATTATCTTAAAAGCTAA Protein sequence : MKYLVTGAAGFIGSKVSERLCAAGHEVVGIDNINDYYDVNLKLDRLKNLQSQTLFSFKKLDLADREGIATLFAEEGFDRV IHLAAQAGVRYSIDNPMAYADSNLVGHLTILEGCRHHKIQHLVYASSSSVYGLNSKMPFSTDDSVDHPISLYAATKKANE LMSHTYSHLYGVPTTGLRFFTVYGPWSRPDMALLKFTNKIVKGEAIDVYNHGNLSRDFTYIDDIVEGIIRIQDSVPVANP EWNAAEATPATSSAPYRVFNIGNGSPVKLMDYISALEKSLGIEAIKNMMDMQPGDVHSTWADTEDLFKTVGYKPQTSVEE GVQKFVEWYKEYYLKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-99 | 60 |
