Gene Information

Name : Shal_1320 (Shal_1320)
Accession : YP_001673547.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5484
EC number : -
Position : 1599150 - 1601003 bp
Length : 1854 bp
Strand : -
Note : PFAM: protein of unknown function DUF264; putative terminase ATPase subunit; KEGG: shm:Shewmr7_0720 protein of unknown function DUF264

DNA sequence :
ATGAATACACTGCAGGTCAGTTGGTTTATTTGTTCACTACTTACGGAGTCGAATCACTCACGCATGGCCTACTCTCCTGA
AATTCGCGAAGCGGTAAAGCGGCTCTATTTAAGGCGCTGGACACCGGACGAGATCCGTCTCGAACTCGACCTGCCTAATA
CGCGGGTGATTTACTTTTGGGCTGACAAATACAGTTGGCGCGATCTGCTGCGCGAGGAAGAAGTCGACGAGGCCATTGCT
CGGCGCATTGTGATGCTGACCGATATCGCTGATAAATCTGGCGGGCAACTTAAAGAGCTCGACATGCTGATTGAAAAGCA
TGTGAAGCTGAAAAAGCAGCGCTTAATCAGTGAAGGCCATTCGTTCGGTGCTAATGGCAGTACTAAGAACAGTGGCAAAA
ATAGCAAAGGCAGCGATCAGCAAAATAATGCAGCGCCAAGCAAGCGTAAAGGTCGTAAACGTAAGAATGACGTTAGCCAT
TTAACCGAGGAAGATTTTAAAGCCTGGTACGCTTCATTATTTGAATATCAAAAGGTGATGCATGAAAACCTGCATCGGCG
TATTCGTAATATTCTTAAGTCGCGCCAGATTGGTGCCACCTATTACTTTGCCGGTGAAGCATTCGAGCAAGCGGTACTTA
CCGGGGATCCGCAAATATTCCTCTCGGCTTCACGTTCGCAGGCCGAAGTATTCCGCACCTATATTGTGCAAATTGCGCAG
CAGTTCTTTGAAATAGAATTAACCGGTAACCCGATTGTATTGCACACCGCACACGGTGATGCCGAGCTAAGGTTTCTGTC
GACGAATAGCAAAACCGCGCAGAGTTACCACGGCCATGTGTATGTGGATGAATACTTTTGGATAGGCAAGTTTGATGTAC
TCAACAAACTAGCCTCTGCTATGGCCACCCATAAAAACTGGCGCAAAACCTACTTTTCTACCCCATCAACCAAAGCGCAC
CCCGCTTACAGCTTTTGGACGGGGGATCACTGGCGCCGCGGTATGAGTGATCGCGAAGAGGTGGAGTTTCCCACCTTTGA
TGCCATGCGTGACCGTGGCCGGTTTTGCCCCGACAAGCAATGGCGCTATGTGGTCACCATTGAAGATGCCCTTGCTGGCG
GTTGTGGACTGTTCGACATTGAGGAGCTGCGCGACGAATACAACGACGATGACTTTAAAAACCTGTTTATGTGCATTTTT
GTTGATGATGCCGATAGCGTATTTAAGTTCAGCGACCTTGAAAAATGCATGGTCGAGTCGGCTCGCTGGCAAGATCACAA
ACCCAAAGAGCAACGGCCATTTGGCAATCGCGAGGTTTGGCTCGGTTATGACCCATCACGAACGCGCGACAATGCCACCT
TAGTAGTGATTGCACCAGGTGAAAAGAAAGGCGAGAAATTCAGAGTACTTGAAAAACACTATTGGCGCGGCTTGAACTTT
TCCCATCACGTAAGCGAAATACAAAAAGTCTATGCCCGTTATCGAGTCACTTACATTGGCGTTGATACCACAGGCATTGG
CGCGGGCGTGTTCGACTCGATTAGCACCTTATTTCCGCGCGAGGCCACGGCGATTCATTACAGCGTTTCAAGCAAAACTC
GCTTAGTACTGAAAATGATTGATGTGGTTGAAAGTGGCCGCATCGAGTGGGACGCCTCCCACAAAGACATTGCCATGAGC
TGCTTATCAATACGCAAGACCACCACCGACACAGGCGGGGCTATCACTTTTAAAGCCAGCCGCGATAACGTAACCGGCCA
CGCCGATGTGTTTTTTGCCATCGCCCACGCCGTTATTAACGAACCACTGAACTTTGCACATAAGAGAACATCATCATGGA
CAATGCAGCATTAG

Protein sequence :
MNTLQVSWFICSLLTESNHSRMAYSPEIREAVKRLYLRRWTPDEIRLELDLPNTRVIYFWADKYSWRDLLREEEVDEAIA
RRIVMLTDIADKSGGQLKELDMLIEKHVKLKKQRLISEGHSFGANGSTKNSGKNSKGSDQQNNAAPSKRKGRKRKNDVSH
LTEEDFKAWYASLFEYQKVMHENLHRRIRNILKSRQIGATYYFAGEAFEQAVLTGDPQIFLSASRSQAEVFRTYIVQIAQ
QFFEIELTGNPIVLHTAHGDAELRFLSTNSKTAQSYHGHVYVDEYFWIGKFDVLNKLASAMATHKNWRKTYFSTPSTKAH
PAYSFWTGDHWRRGMSDREEVEFPTFDAMRDRGRFCPDKQWRYVVTIEDALAGGCGLFDIEELRDEYNDDDFKNLFMCIF
VDDADSVFKFSDLEKCMVESARWQDHKPKEQRPFGNREVWLGYDPSRTRDNATLVVIAPGEKKGEKFRVLEKHYWRGLNF
SHHVSEIQKVYARYRVTYIGVDTTGIGAGVFDSISTLFPREATAIHYSVSSKTRLVLKMIDVVESGRIEWDASHKDIAMS
CLSIRKTTTDTGGAITFKASRDNVTGHADVFFAIAHAVINEPLNFAHKRTSSWTMQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13464.1 predicted ATPase terminase subunit Not tested PAGI-6 Protein 1e-102 44
t4322 NP_807916.1 terminase subunit Not tested SPI-7 Protein 3e-104 43
STY4627 NP_458709.1 probable terminase subunit Not tested SPI-7 Protein 3e-105 43