Gene Information

Name : Shal_1304 (Shal_1304)
Accession : YP_001673531.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1587770 - 1588795 bp
Length : 1026 bp
Strand : -
Note : PFAM: integrase family protein; KEGG: shw:Sputw3181_2916 phage integrase family protein

DNA sequence :
ATGACCATCCGTAACCTAAAAGACAGCAGCGATAAACCTTGGTTATGCGAATGCTATCCCAATGGCCGCGAGGGTAAACG
CATTCGAAAGAAGTTTGCCACTCGTGGTGAAGCCACTGCATTTGAGCTGTTCACCATGAAAAAGGTCGATGACAAACCTT
GGTTAGGTGAAAAGGTTGATAACCGCCGTTTATCTGAGTTAATCAAACGCTGGCATGATCTTCACGGCCAGCAACTAACT
AAGCCAGAGCTGCGGTTACGAAAGCTGGATTTGATTTGCAATGGCATGGGCGACCCGATTGCCAGCAAGATCACCGTGAA
TGACTTTGCCAATTATCGCCAGATGCGCCTCGATGGTGAAATTGAAGATGCTCAAGGTAAGATGAACAAGGTTAAACCCA
ACACCATTAACCATGAGCATGCTTATCTCAATGCGGTTTTCTCAGAGCTGAAAAAGTTAGGCGAGTGGAAGCTACCCAAC
CCACTCGATGGCATATCTCAATTTAAAATTGAAGACACCGAGCTGGCGTTCCTCTACCCAGAAGAGATCCCCATTGTTCT
AACCGAATGTGCTAACGCCGAATACGAACACCTCACCACGATTGTGCTGATCTGTTTAGCAACAGGTTGCCGCTGGTCAG
AGGCCGAAGGTTTACGCGGCAGTCAAATAGCCCACAACCGCATCACCTTTGTTAAAACCAAAGGTAAGAAGAATCGAACC
GTGCCAATAGCGAAAGAATTAGCCGACAAGATACCACGTGCAAGAGGCCCATTATTCAGACCTTGCCGCAAGTCATTTGA
ACGTGCAATTAAACGCACTAAGTTGAATTTCCCAGACAGACAGATGACCCACATTTTACGCCACACATTTGCCAGCCACT
TTATGATGAACGGCGGCAACATTCTGGTACTAAAACAGATACTCGGCCACTCCGATATCAAAGACACCATGCGTTACGCC
CACTTCGCACCCGATCACCTGGACGACGCAATCACAAAAAACCCAATAGCAGGACTACTGAAGTGA

Protein sequence :
MTIRNLKDSSDKPWLCECYPNGREGKRIRKKFATRGEATAFELFTMKKVDDKPWLGEKVDNRRLSELIKRWHDLHGQQLT
KPELRLRKLDLICNGMGDPIASKITVNDFANYRQMRLDGEIEDAQGKMNKVKPNTINHEHAYLNAVFSELKKLGEWKLPN
PLDGISQFKIEDTELAFLYPEEIPIVLTECANAEYEHLTTIVLICLATGCRWSEAEGLRGSQIAHNRITFVKTKGKKNRT
VPIAKELADKIPRARGPLFRPCRKSFERAIKRTKLNFPDRQMTHILRHTFASHFMMNGGNILVLKQILGHSDIKDTMRYA
HFAPDHLDDAITKNPIAGLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 5e-103 62
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 5e-103 62