Gene Information

Name : Shal_1206 (Shal_1206)
Accession : YP_001673434.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : -
Position : 1466213 - 1466878 bp
Length : 666 bp
Strand : +
Note : catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine

DNA sequence :
ATGTTTACAGGGATTATTGAGTCTGTTGGCCACTTAAGAAAAGTAGAGCGCCGCGGTGATGATATTCGTTTAACGGTTGC
CAGTGGCAAGCTGGATCTGTCAGACGTAAAACTAGGCGACAGTATTGCCACCAATGGTGTGTGTTTGACCGTTGTTCAGT
TGATGGCCGACGGGTATGTGGCAGATATTTCAGCCGAAACTGTCAGTTTGACGGGTTTCTCTCATTATCCGGTGGGAAAA
GCCGTTAATCTTGAAAAAGCGGTTACCCCTACAACCCGTTTAGGCGGGCACATGGTTAGTGGTCACGTCGACGGTATTGC
TCATGTGGACGACAGGCAGTTTCGTGGCCAAGCGATTGAGTTTTGGTTAACACCGCCTGTTGAGCTGGGTCGTTATATCG
CCCATAAAGGCTCGATTACCATCGATGGCGTGAGTTTGACTGTCAATGAGGTGCAAGGCCATCGATTTAGACTGACCATA
GTACCGCACACTGCGGGCGAAACCACGTTAGTGGATCTGAAAGCCGGTGATAGCGTCAATATTGAAGTGGACTTAATCGC
CCGTCATTTAGAGAGACTAATGAGTTACCCCAGCCAAGAGCAAGATAATGGCCCCAAGTCTGAAGTGACCATGGAACTGT
TAGCACGCTCAGGTTTTTTACGATAA

Protein sequence :
MFTGIIESVGHLRKVERRGDDIRLTVASGKLDLSDVKLGDSIATNGVCLTVVQLMADGYVADISAETVSLTGFSHYPVGK
AVNLEKAVTPTTRLGGHMVSGHVDGIAHVDDRQFRGQAIEFWLTPPVELGRYIAHKGSITIDGVSLTVNEVQGHRFRLTI
VPHTAGETTLVDLKAGDSVNIEVDLIARHLERLMSYPSQEQDNGPKSEVTMELLARSGFLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 2e-42 47
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 2e-42 47