Gene Information

Name : Shal_1197 (Shal_1197)
Accession : YP_001673425.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1432
EC number : -
Position : 1453055 - 1453573 bp
Length : 519 bp
Strand : -
Note : PFAM: protein of unknown function DUF88; KEGG: sbl:Sbal_3176 protein of unknown function DUF88

DNA sequence :
GTGGCATATGTAACCTGCGTAACATGCTATTTTAATGAGTATACAGTGAAGAAAATTGCCCTATTTGTCGATGTACAAAA
CATCTATTACACCTGCCGCCAAGCATATGGCCGTCAATTCAACTACCGCAAACTCTGGCAACACTTGGGCTATGAAGGCA
ACATTAGCGCCGCCACCGCCTACGCGATTCATCGTGGCGATGATGGTCAACTTAAGTTTCAAGATGCATTAAAACATATT
GGGTTTGAAGTAAAACTTAAGCCTTTTATTCAACGTAGTGACGGTTCAGCTAAAGGGGATTGGGACGTAGGCATCACCAT
AGATATCATGGAAGCGGCAAGTGAGGTCGATTGCGTTATCTTGCTATCTGGAGATGGCGACTTTGATCTTTTAATGCAAA
AAATTAAGCAAAAATATGGTATTGAGACACAAGTTTATGGCGTACCAAGCTTAACCGCCAAATCACTCATCGACTCTGTA
GAGCAATTTCACGAAATTGATGACAGTTTATTACTCTAA

Protein sequence :
MAYVTCVTCYFNEYTVKKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGNISAATAYAIHRGDDGQLKFQDALKHI
GFEVKLKPFIQRSDGSAKGDWDVGITIDIMEAASEVDCVILLSGDGDFDLLMQKIKQKYGIETQVYGVPSLTAKSLIDSV
EQFHEIDDSLLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1407 YP_001217351.1 hypothetical protein Not tested VPI-2 Protein 1e-41 57