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Name : Shal_1058 (Shal_1058) Accession : YP_001673286.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1291470 - 1292933 bp Length : 1464 bp Strand : - Note : catalyzes the formation of betaine from betaine aldehyde DNA sequence : ATGTCACTAGTCGTTTACCCCAATTATATCCACGGCAAAGCACTCAACAATTCCACTGGCGAAACCTTCGAGGTCATCAA TCCAGCCAATGGAGAGGTGAGCTATTTAGTCGAAGTCGCCGATGATAAGATCCTACAAGCCGCCATTGAAAGCGCTAAAG TCGGTTTCGAGATCTGGTCGAAAATGCCCGCCATAGAGCGAAGCCGCATTCTACTTAAGGCCGTTGCGCTGCTGCGTGAG CGCAACGATGAGTTAGCCGCCATTGAAGTACAAGACACAGGAAAGCCTTGGCAAGAAGCCTCAGTGGTCGACGTTGTCAC AGGCGCCGACTCTATCGAGTTCTTTGCAGGCCTAGCGCCCAGTATCGAAGGTAATCAACAGACCGTAGGCGATGACTTTT ATTACACTCGCCGTGAACCTCTGGGTATTTGCGCCGGTATTGGCGCATGGAACTACCCGCTTCAAATCGCTTGTTGGAAA TCCGCACCGGCACTCGCCTGCGGTAACGTGATGATCTTTAAGCCATCAGAGGAAACGCCCCTCGGTGCACTAAAACTGGC TGAGATCTTTACCGAGGCTGGAGTACCTAATGGTGTGTTTAACGTCGTTCAAGGCGATGGTCGTGTTGGCGCTTGGCTGA CCAATAATGATGAGATTGTTAAAGTCTCATTCACTGGTGAAGTCGGTACAGGCAAGAAAGTGATGGCTGCAGCGGCAAGC TCGCTCAAAGAGGTCACCATGGAGCTAGGGGGGAAATCGCCGCTTATCATCTTCAATGATGCCGATATCGACAATGCCGT TTCAGCAGCCATGTTAGGTAACTTCTACACCCAAGGTGAGATCTGCACTAACGCTACCCGCGTATTCGTGCAAAAAGATA TTTACTCGCAATTTATCGCAAAGCTACTGACTCGCACTAAAAACAATATCGTCTGTGGCGATCCAATGGATCCTGAAACC AATTTTGGCGCGCTTATCTCAAAGGCTCACCAAGACAAGGTTCTGAGCTATATAGAGATAGGTAAGCAAGAGGGCGCCGA GCTACTCGCTGGCGGCCATGCATTAACCCCTGAAAATAGTCCTAATGGTTATTTTGTCGCACCCACCATCTTTGGCAACT GCACCGACGAGATGACTCTGAGCAAAGAGGAGATCTTCGGCCCAGTGATGTCTGTACTGCCCTTCAATGATGAAGAGGAA GTGGTTAGCCGCGCTAACGATACCCGTTTAGGTTTAGCGGCAGGCGTGTTTACTCAAGACATTACTCGTGCCCATCGCGT TATTCATCAGATGCAAGCGGGCATTTGCTGGATCAACGCCTATGGCGCCTCACCCGCCGAGATGCCAGTAGGTGGTTACA AGATGTCAGGGATTGGCCGCGAAAACGGCAGCGAGACCCTAAAAGCTTACACCCAAATCAAAGCCGTATACGTGGGTATG CAGCCTCTTGAAAGTCCATTTTAA Protein sequence : MSLVVYPNYIHGKALNNSTGETFEVINPANGEVSYLVEVADDKILQAAIESAKVGFEIWSKMPAIERSRILLKAVALLRE RNDELAAIEVQDTGKPWQEASVVDVVTGADSIEFFAGLAPSIEGNQQTVGDDFYYTRREPLGICAGIGAWNYPLQIACWK SAPALACGNVMIFKPSEETPLGALKLAEIFTEAGVPNGVFNVVQGDGRVGAWLTNNDEIVKVSFTGEVGTGKKVMAAAAS SLKEVTMELGGKSPLIIFNDADIDNAVSAAMLGNFYTQGEICTNATRVFVQKDIYSQFIAKLLTRTKNNIVCGDPMDPET NFGALISKAHQDKVLSYIEIGKQEGAELLAGGHALTPENSPNGYFVAPTIFGNCTDEMTLSKEEIFGPVMSVLPFNDEEE VVSRANDTRLGLAAGVFTQDITRAHRVIHQMQAGICWINAYGASPAEMPVGGYKMSGIGRENGSETLKAYTQIKAVYVGM QPLESPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-75 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-75 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-75 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-75 | 42 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-73 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shal_1058 | YP_001673286.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 2e-73 | 41 |
