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Name : Shal_1001 (Shal_1001) Accession : YP_001673234.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1230433 - 1231881 bp Length : 1449 bp Strand : + Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: shn:Shewana3_3092 succinic semialdehyde dehydrogenase DNA sequence : GTGCAGTTAAATGATATGAGCTTACTACGCCAGCAATGCTATATAGATGGTCAGTGGCTTGAAGCCATCAACGGTGAGAA AGTTGAGATAGCCGATCCTGCCACTCATAAAGTGATTGGTAGTGTGCCTGTGATGGGCACCACCGAAACCAAAGCGGCGA TAACCGCAGCCGAGAAGGCACTACCTGCCTGGCGTGCGTTAACCGCAAAAGAACGTGGCGCCAAGCTGCATCGTTGGTTT GAGTTACTGCTTGAACATCAAGACGACTTAGCACTGATGATGACCACGGAGCAGGGCAAACCCTTAGCTGAAGCTAAGGG TGAGGTCGCCTATGCGGCGTCGTTTATCGAATGGTTCGCCGAGGAAGCTAAGCGCGTTTATGGCGATACTATACCGGGCC ATCAAGGGGATAAGCGTTTGATGGTAATTAAGCAAAGCGTGGGCGTTACTGCGGCAATTACGCCTTGGAATTTTCCGGCG GCGATGATCACCCGTAAAGCCGCCCCAGCACTGGCGGCAGGCTGTACCATGGTGGTTAAGCCTGCACCACAAACCCCATT TACCGCACTGGCGTTAGCAGAACTTGCCGAGCGTGCGGGCATTCCTGCAGGTGTATTTAGTGTCGTCACCGGCGATGCTA TTGCCATCGGTAACGAGCTTTGTAGTAATCCTGTGGTTCGCAAGCTCTCCTTCACTGGCTCCACCCCCGTGGGCATTAAG CTGATGCAGCAGTGCGCGCCGACACTCAAGAAGATGTCACTGGAGCTTGGCGGTAATGCGCCCTTTATCGTATTTAACGA TGCCGATATCGATGCAGCGGTTGAGGGGGCGATGATTGCCAAATATCGCAATGCTGGCCAGACCTGCGTCTGTGCCAACC GCATTTATGTTCAAGACCGTGTATACGATGAGTTTGCCGAGAAGCTGGCCGCTGCCGTTGCCAAGTTAAAGGTGGGCGTA GGCACTGAGGCAGGTGTTACCACTGGGCCACTGATTAACAGTGACGCAGTCGCTAAAGTTCAAAGACATCTGGATGATGC CTTGTCAAAAGGTGCAACTTTGTTTGCTGGTGGCAAGCTAGCGAGTTTAGGCGGTAACTTCTTTGAGCCAACGATTCTTA CAAATGTTGATAAAAGCATGTTAGTCGCTAAAGAGGAAACCTTTGGGCCGCTAGCGCCGCTATTTAAGTTCTCCGATGTC GATGATGTGATTGAGCAGGCCAACGATACCGAGTTTGGTCTAGCAGCCTATTTCTATGGTCGTGACATCTCACTGGTGTG GAAAGTCTCTGAAGCACTGGAGTATGGCATGGTAGGGGTTAACACTGGGCTTATTTCCACCGAAGTGGCGCCGTTTGGCG GCATAAAATCATCGGGATTGGGCCGCGAAGGCTCTAAGTTTGGTATCGAAGAGTACTTGGAGATGAAATACATCTGCATG TCTGTTTAA Protein sequence : MQLNDMSLLRQQCYIDGQWLEAINGEKVEIADPATHKVIGSVPVMGTTETKAAITAAEKALPAWRALTAKERGAKLHRWF ELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFAEEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPA AMITRKAAPALAAGCTMVVKPAPQTPFTALALAELAERAGIPAGVFSVVTGDAIAIGNELCSNPVVRKLSFTGSTPVGIK LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDRVYDEFAEKLAAAVAKLKVGV GTEAGVTTGPLINSDAVAKVQRHLDDALSKGATLFAGGKLASLGGNFFEPTILTNVDKSMLVAKEETFGPLAPLFKFSDV DDVIEQANDTEFGLAAYFYGRDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKSSGLGREGSKFGIEEYLEMKYICM SV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-142 | 65 |
