Gene Information

Name : Caul_5317 (Caul_5317)
Accession : YP_001672096.1
Strain :
Genome accession: NC_010333
Putative virulence/resistance : Unknown
Product : integrase catalytic region
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 27883 - 28803 bp
Length : 921 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: ccr:CC_2742 IS511, transposase OrfB

DNA sequence :
ATGGTAGGGCCCGCCGCCGTGCGCGAAGGCGTCGCTCATCTGCGGACGGTGTTCGAGATCAGCGAGCGGCGGGCCTGCTC
CATCGTCAAGGCGGACCGCAAGATGGTGCGCTACCGCTCTCGCCGCGCGCCCGACACCGAGCTGCGTGAGCGACTGCGCA
GCCTGGCCGCCGAGCGGCGACGGTTTGGCTATCGACGGCTGTTCGTCCTGCTGCGGCGGGAGGGCGAGCCTTCCGGCAAG
AACCGCATCTATCGGCTCTATCGCGAGGAAGGTCTGCCGGTGCGCAAGCGCCGGGCTCGCCGCCGCCCCATCGGCACACG
GGCGCCGATCCTGGTGGAGGCCAAGGCCAACGCCCGCTGGTCGCTGGACTTCGTGCACGATCAGTTCGCGGGCGGACGCC
GGTTCAGGGTTCTCAATGTGGTCGACGACGTCACCCGAGAATGTCTGGCGGCGATCCCTGACACCTCGATCTCAGGTCGG
CGCGTGGCGCGGGAGCTGTCGGCGCTGATCGCCCGTCATGGCCGGCTAGGGATGATCGTCAGCGACAACGGCACGGAGTT
CACCTCGACGGCCATTCTGGCCTGGGCGGAGGATCATCGCGTCGCCTGGCACTATATCGCGCCGGGCAAGCCCACCCAGA
ACGGCTTCGTGGAGAGTTTCAACGGCCGGATGCGCGACGAACTGCTCAACGAGACCCTGTTCTTCAGCCTCGCCCGCCAG
AAGCTCGCCGCCTGGGCCGAAGATTACAACACCCGCCGGCCACACTCATCGATCGGCTACCAGACCCCTGCGGCCTATGC
CGCGCACCTGAACGCAACAGGCCGACCCGCTGCGCAATGTAGAAACTCCACGGCTCGGCCTGTTGCTCCAACCGCGCCAT
CCGGCGTAACCAATGCCGAGACTCTGGTCCGCGCTGGATGA

Protein sequence :
MVGPAAVREGVAHLRTVFEISERRACSIVKADRKMVRYRSRRAPDTELRERLRSLAAERRRFGYRRLFVLLRREGEPSGK
NRIYRLYREEGLPVRKRRARRRPIGTRAPILVEAKANARWSLDFVHDQFAGGRRFRVLNVVDDVTRECLAAIPDTSISGR
RVARELSALIARHGRLGMIVSDNGTEFTSTAILAWAEDHRVAWHYIAPGKPTQNGFVESFNGRMRDELLNETLFFSLARQ
KLAAWAEDYNTRRPHSSIGYQTPAAYAAHLNATGRPAAQCRNSTARPVAPTAPSGVTNAETLVRAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-40 49
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 9e-37 41