|
Name : Caul_5449 (Caul_5449) Accession : YP_001672222.1 Strain : Genome accession: NC_010333 Putative virulence/resistance : Unknown Product : type III restriction protein res subunit Function : - COG functional category : S : Function unknown COG ID : COG4951 EC number : - Position : 162668 - 165115 bp Length : 2448 bp Strand : - Note : PFAM: DNA primase small subunit; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: dsh:Dshi_4007 type III restriction protein res subunit DNA sequence : ATGTCTGATCGGGAAGATCGACAACGGCGGCTCCAGGAACGTCTTCGCCAGTTGGAGCAAGAGCGGGCGGCGATCGAGGA CGAACTCGCGGGAATGGTCATGGCCGCCGCTCGCGAGACTTCGCGCCCCCCGGCAATGGCGTTGCAACAGCCGCGGCAGG ATCAAGCCTTTGACAATCGCGCCAAGGTTGAACTTTTTCGAAGCCTGTTTCGGGGGCGAAGCGACGTATTCCCGCTGCGT TGGGAAAACCTGAAGACAGGTAAGAGCGGCTACGCGCCGGCCTGCGCCAACGAGTGGAAGCGGGGTCTGTGCGAGAAGCC GCGGATCAAGTGCTCTGTGTGCGCAAATCAGGCTTTCATTGAAGTCAGCGACCAGGTGATCACCCACCACCTGAGGGGGC AAGGCCCGGGCGGCGCCGCGTTCGTCGCGGGCGTCTACCCGGTTCTACCGGACGACACCTGTTGGTTCTTGGCGGCCGAC TTTGATGAGGCGGAATGGCGACGGGATGTGAAAGCCTTCGCCGAAACCTGCCGCGCCTGGGATGTGCCTGTCGCCATTGA ACGATCACGCTCCGGCAACGGCGCCCATGCGTGGATCTTCTTCAGCGAGCCGATTTCGGCCTCGCTGGCCCGACGCTTGG GATCGGCTCTGATCACCGAGACCTTGGACCGGACGCCCGACATCGGGTTTGCGTCCTATGATCGCTTGTTTCCCAGCCAG GATACCGTCCCAAGCGGCGGCTTTGGCAACCTCATTGCCCTGCCGTTGCAGGGCTTGGCGCGCCAGGCCGGCAATAGCGT GTTCCTGGACGATGACCTCGATCCCTACGACGACCAATGGAGGTGCCTGGCTGGCGTCCGGCGTCTCAAACGCGACACCC TGGAGGCCCTGGTTGATGCCGCCAGCGCAGCCGGTCGGATTCTTGGGGTCAGGATCCCTGTCGATGACGATGATGAGGAG CCGTGGCTGGCCCCGCCCTCGCGCCGGCGAACGCCGCCGGCGATTGCCGGGCCCCGGCCGAGCAATCTCACGATGGTCGT CGCAGACCAGCTCTATATTCCGCGCAGTGGTCTGCCGTCTGGCCTGGTCGCGCGCCTGATACGGCTGGCGGCGTTTCAAA ATCCTGAGTTCTACGCCGCCCAGGCGATGCGGTTTGCGACCCACGACAAGCCACGGATCGTATCGTGCGCGGAGCTGACC GTGAACCACATCGGTCTGCCGCGGGGCTGCTTTGATGTGGCGATGGACCTGTTCGCGTCGCTGGGCGTCGCGGTGGAAAT CGAGGATCAGCGCCGTCGTGGCGCGGCGATCAACATTTCATTCAGTGGCGTATTGCGACCGGACCAGGAGCTGGCGGTCG ATGCGCTGCTGCCGCACGACATCGGCGTGCTCGCCGCGACGACGGCTTTCGGGAAGACCGTGGTGGCGGCGCGGATGATC GCGGAGCGCGGGGTCAACGTGCTCGTTCTGGTCCATCGTCGCCAGCTGATGGACCAGTGGGTGGAGCGCCTCGGCGCGTT TCTCAACACCGCGCCAGGGATGATCGGCAAAATCGGTGGCGGCAAACGCAAGCCCTCGGGCCTCATCGACATCGCCCTTA TCCAGAGCCTGGTCAGAAAAGGGGAGGTGGACGATATCGTGGGCGACTATGGCCACCTCATCGTCGATGAATGTCACCAT CTTTCGGCCGTTAGCTTCGAGCAGGTCGCCAGGCGGACAAAGGCCCGCTACGTCCTTGGGCTATCGGCGACGGTGACCCG GAAAGACGGCCACCATCCGATCATCTTCATGCAGTGCGGGCCGGTTCGAAAACGTGTCGATGCGCGCGCCGAGGCGGCGA GACGTCCGTTCGATCATCACGTCCGGATTCGGCAGACGGCGTTTCGGCTGCCAGACAGCGAGGCGAACGCGGCGGCGGTT CCGATCCAGGACGTCTATCGGGCGCTCGCCGGCGACGAGGGCCGCAACGAACTGATCTTCAATGACGTGTTGGCTGCGTT GGAAGCTGGGCGCTCACCGGTCGTCATCACTGAGCGGACGGATCATCTGGAAGCGCTGGCCGATCGGCTTTCGCGCTTCG CCAAGAACGTTATCGTTTTACGTGGCAGCCAAAGCGAGCGGAAACGGCGAGAGGCGATGGAGCGCCTCGCGGCGATTCCG GAGCAGGACGAGCGGGTGATCGTGGCGACCGGTCGCTACCTCGGGGAGGGCTTTGATGACCAGCGCCTGGACACGCTCTT CCTCACCATGCCGATCGCATGGAGGGGAACCTTGGCGCAGTATGCCGGTCGTCTTCACCGGCTTCATGACCCCAAGCGGG AAGTGGTCATCTATGACTACGTCGACCGCGACGTCCCGGTGCTCGCCCGTATGGCGGCCAGACGCGCCACAGGGTATTCG GGGATCGGCTATACGACCGTCCAGAGGCCTGGATTGTTCGACCGATAG Protein sequence : MSDREDRQRRLQERLRQLEQERAAIEDELAGMVMAAARETSRPPAMALQQPRQDQAFDNRAKVELFRSLFRGRSDVFPLR WENLKTGKSGYAPACANEWKRGLCEKPRIKCSVCANQAFIEVSDQVITHHLRGQGPGGAAFVAGVYPVLPDDTCWFLAAD FDEAEWRRDVKAFAETCRAWDVPVAIERSRSGNGAHAWIFFSEPISASLARRLGSALITETLDRTPDIGFASYDRLFPSQ DTVPSGGFGNLIALPLQGLARQAGNSVFLDDDLDPYDDQWRCLAGVRRLKRDTLEALVDAASAAGRILGVRIPVDDDDEE PWLAPPSRRRTPPAIAGPRPSNLTMVVADQLYIPRSGLPSGLVARLIRLAAFQNPEFYAAQAMRFATHDKPRIVSCAELT VNHIGLPRGCFDVAMDLFASLGVAVEIEDQRRRGAAINISFSGVLRPDQELAVDALLPHDIGVLAATTAFGKTVVAARMI AERGVNVLVLVHRRQLMDQWVERLGAFLNTAPGMIGKIGGGKRKPSGLIDIALIQSLVRKGEVDDIVGDYGHLIVDECHH LSAVSFEQVARRTKARYVLGLSATVTRKDGHHPIIFMQCGPVRKRVDARAEAARRPFDHHVRIRQTAFRLPDSEANAAAV PIQDVYRALAGDEGRNELIFNDVLAALEAGRSPVVITERTDHLEALADRLSRFAKNVIVLRGSQSERKRREAMERLAAIP EQDERVIVATGRYLGEGFDDQRLDTLFLTMPIAWRGTLAQYAGRLHRLHDPKREVVIYDYVDRDVPVLARMAARRATGYS GIGYTTVQRPGLFDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1129 | NP_286664.1 | helicase | Not tested | TAI | Protein | 1e-167 | 47 |
| Z1568 | NP_287072.1 | helicase | Not tested | TAI | Protein | 1e-167 | 47 |
