Gene Information

Name : PputGB1_0782 (PputGB1_0782)
Accession : YP_001667028.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 890255 - 891223 bp
Length : 969 bp
Strand : -
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: pen:PSEEN0883 hypothetical protein

DNA sequence :
ATGCTCGACTCTTTCGCCTGCAGCAAGCCGCGTATCGCCATCAGTGCCTGCCTGACTGGGCACAGCGTGCGCTACAACGG
CGGCCACAAGGCCTCCGATCTTTGCCGTACACAGCTGGAACAACACTTCGAATGGCTGCCCGTGTGCCCGGAAGTGGCAA
TCGGCCTGGGCATTCCGCGTGACCCCATTCGCCTGGTAGGCAACCCCGAACAACCCGAAGTGGTCGGCACCCGCGACCCT
GGCATGGACCTGACCGGCCCGCTGCGCACCTATGGCGAACAAATGGCGGCTGAGCTCGACGACATCTGCGGCTACATCTT
CATGCAGAAGTCACCTTCTTGCGGCCTGGAACGGGTCAAGGTTTACCAGGCCAACGGCCACCCAGCCTTGCATGGCGGGC
GTGGCGTCTATGCCCACGCTTTCTGCGCTCTGCGCCCGGACCTGCCCGTTGAAGAAGAAGGCCGCCTGCATGACCCCGTG
CTGCGCGAGAACTTCATCAGCCGCGTATACGCCTACGCCGACTGGCAGCGCCTGCTGGCCGAAGGGCTGAGCCGTGGCGC
CCTGGTGCGCTTTCACTCGCGCTACAAGTATTTGCTGATGGCCAACAACCCGCAGGCCTATCGCACCCTCGGCCGCCTGC
TTGGCAGCATGAGCAAGGATGACGACCCGCTCAGCTTCGGCCCGCGCTATTTCAGCCAACTGATGCAGGCCCTGCGCCGC
TGCGCCAGCCGCGGCACCCACTGCAACGTGCTGCAGCACCTGAGCGGTTACTTCAAGGATGCCCTGACGCAGCAGGACAA
GGCCGAGTTGCAGACGGTCATCGGCCAGTACCAACAGGGCGTCGTGCCGCTGGTAGTGCCCCTGACTCTGCTCAAGCACC
ATCTGCGCAAGCACCCTGACCCGTACCTGCAGCAGCAGGCCTACCTGCAACCGCACCCTGAAAGCCTGGGCTTGCGCAAT
GCAGTCTGA

Protein sequence :
MLDSFACSKPRIAISACLTGHSVRYNGGHKASDLCRTQLEQHFEWLPVCPEVAIGLGIPRDPIRLVGNPEQPEVVGTRDP
GMDLTGPLRTYGEQMAAELDDICGYIFMQKSPSCGLERVKVYQANGHPALHGGRGVYAHAFCALRPDLPVEEEGRLHDPV
LRENFISRVYAYADWQRLLAEGLSRGALVRFHSRYKYLLMANNPQAYRTLGRLLGSMSKDDDPLSFGPRYFSQLMQALRR
CASRGTHCNVLQHLSGYFKDALTQQDKAELQTVIGQYQQGVVPLVVPLTLLKHHLRKHPDPYLQQQAYLQPHPESLGLRN
AV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-58 44
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-58 44
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 9e-59 44
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 5e-59 44
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 6e-59 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_0782 YP_001667028.1 hypothetical protein VFG0490 Protein 4e-59 44