|
Name : PputGB1_0681 (PputGB1_0681) Accession : YP_001666927.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 774308 - 775513 bp Length : 1206 bp Strand : + Note : PFAM: integrase family protein; KEGG: psa:PST_0259 site-specific recombinase, phage integrase family DNA sequence : ATGCCTTTGACGGCTTTGCAGGTTAAGAATGCTGCACCACGTGAGAGGGACTATGGCCTTGCGGATGGCGGTGGTCTTTT CCTCTGGATTCGCGCGGCAGGCGGAAAGTCCTGGCGCTTTCGCTTCCGTCTGGATGGCAAGCAATCTCACATTTCCCTTG GCACAGTCGACAAGGTGACCCTTGCACAGGCGCGGCAGCTTGCGTCCGAGTCTCGCCAACTTGTGGCGCAGGGGCGGCAT CCTGGGCTTGAACGGAAGGTTGCGCGAGCGCAGGCGGCAATCTCTCGTGCCAACACCTTCAAAAGCCTTGCGCTGGAGTG GCATCAACACAAGTCGCAGCGCTGGTCGGTAGGTTATGCCAATGATGTGATGGAAGCGTTTGAGCTGGACATCTTCCCCC TGCTGGGAAGTCTCCCTCTTACCGACATAAAGCCTATGCAGTGGCTACAGGTTTTTCGTCGCATAGAGTCGCGGGGTGCT TTGGAGAAGCTGCGTAAGGTCAGGCAACGCTGCCAGGAGGTCTATCGTTTCGCGATTGCCACTGGCCGTGCTGAGTACAA CCCTATCTCAGATATTGGTGGAGCTCTTCAGACGCCTACGTCTCGACACTATCCCTTCCTGCCTATTGCGGAGCTTCCGG AATTGATACGCAGTTTTCAGGCGTGTCCAGGGCACGACGTGGTGAAAATCGCTACTCGCCTGCTGATCCTGACGGGGGTG CGCACAGCTGAGCTGAGGGGAGCGCTCTGGTCGGAGTTTGACCTCAAGGACGCTCTCTGGCAGATCCCAGCTTCACGTAT GAAAATGCGTCGGGCACATTTGGTCCCTCTTTCAAAGCAGGCGGTGGCTGCACTAAGTGAGCTGGAAGGTATTACCGGTG GCTACACGCTCGCTTTTCCTGGCCGCAACGATCCGGCCAAGCCTATGAGTGAGGCCGCTATCAACCAGCTGCTTAAGCGT TCTGGATATGATGGCCGGGCTACGGGCCATGGATTCCGTCACACGATGTCCACCACTCTACATGAGCAGGGGTATCGTAG TGAGTGGGTCGAGACCCAGCTTGCGCACGTTGATAAGAATAGTATTCGCGGCACTTATAACCATGCCCAGTATCTTGAGG GGCGCCGGGAGATGCTTCAGTGGTATGCGGAGCATTTAGAAGCCTTATCGCGTCCGAGAGCAATGGAGGGTAAGTCGCAT GAGTGA Protein sequence : MPLTALQVKNAAPRERDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTVDKVTLAQARQLASESRQLVAQGRH PGLERKVARAQAAISRANTFKSLALEWHQHKSQRWSVGYANDVMEAFELDIFPLLGSLPLTDIKPMQWLQVFRRIESRGA LEKLRKVRQRCQEVYRFAIATGRAEYNPISDIGGALQTPTSRHYPFLPIAELPELIRSFQACPGHDVVKIATRLLILTGV RTAELRGALWSEFDLKDALWQIPASRMKMRRAHLVPLSKQAVAALSELEGITGGYTLAFPGRNDPAKPMSEAAINQLLKR SGYDGRATGHGFRHTMSTTLHEQGYRSEWVETQLAHVDKNSIRGTYNHAQYLEGRREMLQWYAEHLEALSRPRAMEGKSH E |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 6e-109 | 55 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 2e-110 | 55 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 9e-109 | 54 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 9e-109 | 54 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 7e-109 | 54 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 7e-109 | 54 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 4e-109 | 53 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 8e-108 | 53 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 4e-109 | 53 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 3e-107 | 53 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 4e-107 | 53 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 4e-107 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_0681 | YP_001666927.1 | integrase family protein | VFG0783 | Protein | 4e-109 | 54 |
| PputGB1_0681 | YP_001666927.1 | integrase family protein | VFG0598 | Protein | 2e-107 | 53 |
