Gene Information

Name : PputGB1_0590 (PputGB1_0590)
Accession : YP_001666837.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 665804 - 667324 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN0634 NAD+ dependent aldehyde dehydrogenase

DNA sequence :
ATGCGTTACGCACATCCCGGTACCGAAGGCGCGAAGGTTTCCTTCAAGAGCCGCTACGGCAACTACATCGGTGGTGAGTT
CGTTCCTCCGGTAAAGGGGCAGTACTTCGAAAATACCTCCCCGGTGAATGGCAAGCTGATCGCTGAATTCCCTCGCTCCA
CTGCCGAAGACATCGACAAGGCCCTGGATGCCGCCCATGCTGCGGCCGACGCCTGGGGCCGCACGTCGGTGCAGGACCGC
TCCAACGTTCTGCTGAAGATTGCCGACCGTATCGAGCAGAACCTCGAGCTGCTGGCCATTACCGAAACCTGGGACAACGG
CAAGCCAATCCGCGAAACCCTAAACGCCGACATCCCGCTGGCGGTCGACCACTTCCGCTACTTCGCTGGCTGCATCCGCG
CCCAGGAAGGCGGCGCGGCCGAGATCAACGAAGGCACCGTGGCCTATCACATCCATGAGCCGCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCGGCCTGGAAGCTGGCGCCCGCGCTGGCCGCGGGTAACTGCGTGGTGCT
CAAGCCTGCCGAGCAAACGCCCCTGGGCATCACCGTGCTGCTGGAAGTGATCGGCGACCTGCTGCCACCTGGCGTGCTGA
ACGTGGTGCAAGGCTATGGCCGCGAAGCCGGTGAAGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCGACCCCGGTTGGCTCGCACATCATGAAATGCGCCGCCGAGAACATCATCCCGTCAACTGTCGAACTGGGCGGCAAATC
GCCGAACGTGTACTTCGAAGACATCATGCAAGCCGAGCCAAGCTTCATCGAGAAGGCGGCCGAAGGCATGGTGCTGGCAT
TCTTCAACCAGGGCGAAGTGTGCACCTGCCCATCGCGGGCACTGGTACAGGAGTCGATCTACCCGCAGTTCATGGAAGTG
GTGATGAAGAAGGTGCTGCAGATCAAGCGCGGCGACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCCTCGCAGCA
GCAGTTCGAGAAGATTCTGTCGTACCTCGACATCGCCCAGAAGGAAGGCGCCGAGCTGCTGACCGGCGGCAAGGTGGAAA
AACTGGAAGGCTCGCTGGCCACCGGTTACTACATCCAACCGACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTCAGCGTCACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATTGCCAACGACACCGA
GTTCGGCCTGGGCGCCGGCGTATGGACCCGCGACATCAACCGTGCCTACCGCATGGGCCGTGGCATCAAGGCTGGCCGTG
TATGGACCAACTGCTACCACCTGTACCCGGCGCATGCCGCGTTTGGCGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACG
CACAAGATGATGCTCGACCACTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGCTGGGCTTCTTCTA
A

Protein sequence :
MRYAHPGTEGAKVSFKSRYGNYIGGEFVPPVKGQYFENTSPVNGKLIAEFPRSTAEDIDKALDAAHAAADAWGRTSVQDR
SNVLLKIADRIEQNLELLAITETWDNGKPIRETLNADIPLAVDHFRYFAGCIRAQEGGAAEINEGTVAYHIHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLLEVIGDLLPPGVLNVVQGYGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNVYFEDIMQAEPSFIEKAAEGMVLAFFNQGEVCTCPSRALVQESIYPQFMEV
VMKKVLQIKRGDPLDTDTMVGAQASQQQFEKILSYLDIAQKEGAELLTGGKVEKLEGSLATGYYIQPTLLKGNNKMRVFQ
EEIFGPVVSVTTFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-150 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-157 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-157 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-157 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-156 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_0590 YP_001666837.1 aldehyde dehydrogenase VFG0082 Protein 3e-150 66