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Name : PputGB1_0560 (PputGB1_0560) Accession : YP_001666807.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 635223 - 636353 bp Length : 1131 bp Strand : + Note : KEGG: pen:PSEEN0588 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein DNA sequence : ATGCCCAGCCAAGCTGCCGTCCTCGACGCCCATTACATGGCCCGCGCGCTGGAGCTGGCGCGCAAAGGCCTGTACACCAC TCACCCGAACCCGCGCGTGGGCTGCGTGATCGTGCGCGATGGCGAAGTGGTCGGTGAAGGCTGGCACGTGCGTGCCGGCG AGCCGCATGCCGAAGTGCACGCCCTGCGCCAGGCTGGTGAGCGCGCCATTGGCGCCTGTGCCTACGTCACCCTTGAACCG TGCAGCCATCATGGCCGCACGCCGCCGTGCGCCGAAGCACTGGTCAAGGCCGGTGTGGCGCGAGTGGTGGCGGCCATGCA GGACCCCAACCCGCAAGTGGCAGGCCAGGGCTTGCAGCGCTTGGCCGAGGCAGGCATTGAAGTCGCCAGCGGCGTGCTCG AAACCGAAGCCCGCGCACTGAACCCGGGCTTCCTCAAGCGCATGGAGCACGGCCTGCCGTTCGTCCGCGCCAAGCTGGCC ATGAGCCTGGATGGCCGCACCGCGATGGCCAGTGGCGAAAGCCAGTGGATCACCGGCCCGGCTGCCCGTTCGGCGGTGCA GCGCTTGCGCGCCCGTTCCAGCGTGGTGCTGACCAGCGCTGCCAGTGTGCTGGCCGACAATGCACGAATGACCGTGCGTG GCACCGAGCTGGGCCTGGATGCCGAAACCACCGCCCTGGCACTCAGCCGTACACCGCTGAGGGTGCTGGTCGATAGTCGC CTGCGCCTGCCGCTGGATGCGGCTTTCTTCCAAGCCGGGCCGGCGCTGGTGGTGGCTGCTGTCGCAGATGACCCGCGTTA TGCCGCTGCCGGCCACGAGTTGCTCAGCCTGCCGGGTGACAATGGCCAGGTCGACTTGCCGGCGCTGCTGCAAGCCCTGG CGGCCCGAGGTGTCAACGAAATCCTGCTGGAAGCCGGTGCCGGCCTGGTCGGCGCCTTTGCCCAGCAAGGCCTTGTCGAT GAGTACCAGCTGTTTGTCGCCGGCACCTTCCTTGGCTCCCAGGCCCGGCCGCTGCTGGACTGGCCGCTGGGCAAGATGAG CGAGGCACCAAGGCTGAAAATTACCGAAATGCGCGCAGTGGGCGATGACTGGCGGGTCACGGCCATCCCCTTGCCGGCGC CCGGCGTATAA Protein sequence : MPSQAAVLDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGERAIGACAYVTLEP CSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLQRLAEAGIEVASGVLETEARALNPGFLKRMEHGLPFVRAKLA MSLDGRTAMASGESQWITGPAARSAVQRLRARSSVVLTSAASVLADNARMTVRGTELGLDAETTALALSRTPLRVLVDSR LRLPLDAAFFQAGPALVVAAVADDPRYAAAGHELLSLPGDNGQVDLPALLQALAARGVNEILLEAGAGLVGAFAQQGLVD EYQLFVAGTFLGSQARPLLDWPLGKMSEAPRLKITEMRAVGDDWRVTAIPLPAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-61 | 50 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-61 | 50 |
