Gene Information

Name : PputGB1_5330 (PputGB1_5330)
Accession : YP_001671547.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 5954805 - 5956298 bp
Length : 1494 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN5424 aldehyde dehydrogenase

DNA sequence :
ATGACCACCCTGACCCGTGCGGACTGGGAACAACGTGCCCAGCAACTGAAGATCGAAGGCCGTGCCTTCATCAACGGCGA
ATACACCGATGCCGCATCCGGTGAAACCTTCGAGTGCCTGAGCCCGGTCGACGGACGCTTCCTGGCCAAGGTTGCCAGCT
GCGACCTGGCCGATGCCAATCGCGCTGTGGAAAACGCCCGTGCCACCTTCAACTCCGGCGTCTGGTCGCAACTGGCTCCG
GCCAAGCGCAAGGCCAAGCTGATTCGCTTCGCCGACCTGCTGCGCAAGAACGTCGAAGAGCTGGCGCTGCTGGAAACCCT
GGACATGGGCAAGCCGATCGGCGACTCCTCCAGCATCGACATCCCAGGTGCGGCCCAAGCCATCCACTGGACTGCCGAAG
CCATCGACAAGGTCTACGACGAAGTCGCCCCGACCCCGCACGACCAGCTTGGCCTGGTTACCCGCGAACCGGTGGGCGTG
GTGGGTGCCATCGTGCCGTGGAACTTCCCGCTGCTGATGGCTTGCTGGAAACTCGGCCCTGCGCTGGCCACCGGTAACTC
GGTGGTGCTCAAGCCGTCCGAAAAATCGCCGCTGACGGCCATTCGCATCGCCCAGCTGGCCATCGAGGCCGGCATCCCGG
CTGGTGTGCTGAACGTGCTGCCAGGTTACGGCCACACCGTGGGCAAGGCTTTGGCCCTGCACATGGACGTCGACACCCTG
GTGTTCACCGGTTCCACCAAGATCGCCAAGCAGTTGATGGTTTACGCGGGCGAATCGAACATGAAGCGCATCTGGCTGGA
AGCCGGCGGCAAGAGCCCGAACATCGTCTTCGCCGATGCGCCGGACCTGCAAGCTGCCGCTGAGGCCGCTGCCAGCGCCA
TCGCCTTCAACCAAGGCGAAGTGTGCACCGCAGGCTCGCGTCTGCTGGTCGAGCGTTCGATCAAGGACAAATTCCTGCCG
ATGGTGGTCGAGGCCCTCAAAGGCTGGAAGCCAGGCAACCCGCTGGACCCACAGACCACGGTCGGTGCCCTGGTCGACAC
CCAGCAGATGAACACCGTGCTGTCGTACATCGAGGCTGGCCACCAGGACGGCGCCAAGCTGCTGGCCGGCGGCAAGCGCA
CCCTGGAAGAGACTGGCGGCACCTACGTCGAGCCGACCATCTTCGACGGCGTGACCAACGCCATGCGCATTGCCCAGGAA
GAAATCTTTGGCCCTGTGCTGTCGGTGATCGCCTTCGACACCGCCGAAGAAGCCATCGCCATTGCCAACGACACGCCGTA
TGGCCTGGCGGCTGGTATCTGGACCTCGGACATTTCCAAGGCCCACAAGACCGCCCGTGCCGTGCGCGCTGGCAGCGTCT
GGGTCAACCAGTACGACGGCGGCGATATGACCGCGCCGTTCGGTGGCTTCAAACAGTCGGGTAACGGCCGTGACAAGTCG
CTGCATGCGCTGGAGAAATACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAA

Protein sequence :
MTTLTRADWEQRAQQLKIEGRAFINGEYTDAASGETFECLSPVDGRFLAKVASCDLADANRAVENARATFNSGVWSQLAP
AKRKAKLIRFADLLRKNVEELALLETLDMGKPIGDSSSIDIPGAAQAIHWTAEAIDKVYDEVAPTPHDQLGLVTREPVGV
VGAIVPWNFPLLMACWKLGPALATGNSVVLKPSEKSPLTAIRIAQLAIEAGIPAGVLNVLPGYGHTVGKALALHMDVDTL
VFTGSTKIAKQLMVYAGESNMKRIWLEAGGKSPNIVFADAPDLQAAAEAAASAIAFNQGEVCTAGSRLLVERSIKDKFLP
MVVEALKGWKPGNPLDPQTTVGALVDTQQMNTVLSYIEAGHQDGAKLLAGGKRTLEETGGTYVEPTIFDGVTNAMRIAQE
EIFGPVLSVIAFDTAEEAIAIANDTPYGLAAGIWTSDISKAHKTARAVRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHALEKYTELKATWIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-132 59
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-76 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-76 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-76 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-76 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 4e-69 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_5330 YP_001671547.1 aldehyde dehydrogenase VFG0082 Protein 3e-76 42