Gene Information

Name : PputGB1_5219 (PputGB1_5219)
Accession : YP_001671437.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 5833065 - 5833838 bp
Length : 774 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN5259 amino acid ABC transporter, ATP-binding protein

DNA sequence :
ATGAGCGCACTGATCGAATTCCAGGGTTTCAACAAGTTTTTTGGCGAGCACCAGGTGCTCAAGGACGTCGACCTGCAGGT
GGCGGCCGGTGAAGTGGTGGTCATCCTCGGCCCCAGTGGCTGTGGCAAAAGCACGCTGCTGCGCTGCCTCAACGGCCTTG
AGCAGGCCCACAGCGGGCACCTGCGCCTGGCCGGGCAAGAATTGCTCGCCCCGCACACCGACTGGCGCGCCATCCGCCAG
CGGGTCGGCATGGTGTTCCAGAGCTACCACCTGTTCGGCCATATGAGCGTGATCGACAACCTGCTGCTGGGCCCGCTGAA
AGTGCAAAAGCGCGAGCGGGCCGAAGCCCAGGCCCAGGCCGAGGCGCTGCTGGCGCGGGTCGGCCTGCTGGACAAGCGCG
ACGCGTTCCCCCGGCAATTGTCCGGGGGCCAGCAACAGCGCATCGCCATCGTGCGCGCGTTGTGCATGAACCCCGAGGTG
ATGCTGTTCGACGAAGTTACCGCTGCCCTCGACCCAGAAATGGTCAAGGAGGTGCTGCAGGTAATTCAGGGCCTGGCCCG
CGACGGCATGACCTTGCTCATCGTTACCCACGAAATGGCCTTCGCTCGCGCGGTGGCCGACCGCATCGTGTTCATGGAGG
CCGGCAGGGTCCTTGAACAGGGTGACCCCGAGAGCTTCTTCACCCGACCGCGGACCGCACGCGCGCAGCAGTTCCTGGAG
AAATTCTCCTTCGTAGAAAGCCTGCCAAAGACATTGCACAAGGAACTGTCATGA

Protein sequence :
MSALIEFQGFNKFFGEHQVLKDVDLQVAAGEVVVILGPSGCGKSTLLRCLNGLEQAHSGHLRLAGQELLAPHTDWRAIRQ
RVGMVFQSYHLFGHMSVIDNLLLGPLKVQKRERAEAQAQAEALLARVGLLDKRDAFPRQLSGGQQQRIAIVRALCMNPEV
MLFDEVTAALDPEMVKEVLQVIQGLARDGMTLLIVTHEMAFARAVADRIVFMEAGRVLEQGDPESFFTRPRTARAQQFLE
KFSFVESLPKTLHKELS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_5219 YP_001671437.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-26 42