Gene Information

Name : PputGB1_5193 (PputGB1_5193)
Accession : YP_001671411.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 5807933 - 5808376 bp
Length : 444 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN5233 transcriptional regulator CadR

DNA sequence : 
ATGAAAATCGGAGAACTGGCCAAAGCCACCGACTGTGCGGTGGAAACCATTCGCTACTACGAGCGGGAAAACCTGCTGCC
GGAGCCTGCGCGCAGTGACGGCAACTACCGGCTGTATACCCAGGCTCACGTCGAGCGGCTGACCTTCATCCGTAACTGCC
GCACCCTGGACATGACCCTGGACGAAATTCGCAGCCTGCTACGCCTACGCGACAGCCCGGATGACTCGTGCGGCAGTGTC
AACGCGCTGATCGACGAGCATATCGAGCATGTGCAGGCGCGTATCGACGGTTTGGTGGCGTTGCAGGAACAGCTGGTAGA
GCTGCGGCGGCGCTGCAATGCGCAAGGGAGTGAGTGCGCGATTTTGCAGCGATTGGAGACGAACGGGGCGGTATCGGTAC
CGGATACCGAGCATTCGCATGTGGGGCGCAGCCACGGGCATTGA

Protein sequence : 
MKIGELAKATDCAVETIRYYERENLLPEPARSDGNYRLYTQAHVERLTFIRNCRTLDMTLDEIRSLLRLRDSPDDSCGSV
NALIDEHIEHVQARIDGLVALQEQLVELRRRCNAQGSECAILQRLETNGAVSVPDTEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 3e-36 55
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 3e-32 52
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-32 52
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 2e-32 52
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-32 52
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 2e-32 52
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 2e-32 52
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-32 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_5193 YP_001671411.1 MerR family transcriptional regulator BAC0058 Protein 6e-64 98
PputGB1_5193 YP_001671411.1 MerR family transcriptional regulator BAC0301 Protein 2e-34 58