Gene Information

Name : PputGB1_0510 (PputGB1_0510)
Accession : YP_001666757.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : 1.11.1.6
Position : 582239 - 583678 bp
Length : 1440 bp
Strand : +
Note : PFAM: Catalase domain protein; KEGG: pen:PSEEN0517 catalase (hydroperoxidase II)KatA

DNA sequence :
ATGAGCAAGATTCTTACTACCGCCAGCGGTGCGCCAGTAGCCGATAACCAGAACTCCCGCTCCGCCGGCCCGCGTGGCCC
ATTGTTGCTCGACGACTTTCACCTGATCGAGAAACTCGCCCACTTCAACCGCGAGAACATTCCTGAGCGCCGTGTGCACG
CCAAGGGCTCGGGCGCCTATGGCACCTTTACTGTTACCCGCGACATTACCGGCTATACCAGCGCCAAGCTGTTTGAACAG
ATCGGCAAACAGACCGAGACCTTCCTGCGCTTCTCCACTGTCGGTGGCGAGCGTGGCTCTGCGGATACCGAGCGCGACCC
GCGTGGTTTCGCGGTCAAGTTCTACACCGAAGAAGGCAACTGGGACATCGTTGGCAACAACACGCCCGTGTTCTTCATTC
GCGACCCGCTGAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCCCAGATGATG
TGGGACTTCTGGTCCCACTCCCCTGAGGCGCTGCACCAGGTCACCATACTGTTTTCCGACCGTGGTATCCCGGATGGCTA
TCGCCACATGCACGGCTTCGGCAGCCACACCTACAGCCTGATCAATGCCAAGGGTGAGCGTACTTGGGTGAAGTGGCACT
TCAAGACCCAACAAGGCATCAAGAACCTCGCTCCGGCAGAAGCAGCGCGCCTGGCGGGTACTGACCCGGACTACGCCCAG
CGCGACCTGTTCGAAGCGATCGAGCGTGGCGACTACCCGCGTTGGACGGTTTGTATCCAGGTGATGAGCGAAGCCGAGGC
TGCGAGTCGCGACGAGAACCCCTTTGACGTGACCAAGACTTGGTCGCAGAGGGACTACCCGCTGATCGAGGTGGGCGTGC
TGGAGCTCAACCGTAACCCGCTCAACTACTTCGCGGAAGTCGAGCAAGCAGCGTTCGGGCCCAGCAATATGGTGCCAGGG
GTCGGCCTGTCGCCGGACCGGATGTTGCAGGGCCGTGTATTCGCCTACGCCGACGCGCACCGTTACCGCGTGGGCACCAA
CCACCAGCAGTTGCCGGTGAATGCGCCTCGCTGCCCGGTTAATAGCTACCAGCGCGACGGTTCCATGGCCACTGGCAGCT
ACGGCAGTGCACCAAACTACGAGCCCAATAGCCACGTTGATGCGCCGAAGCAGTCGCCACGCCATGCCGAGCCAGCGCTG
GCCTTGAACGGTTCGGCGGACCGTTACGATCACCGTGAGGACACCGACTACTTCAGCCACGCCGGCGCGCTGTTCCGCTT
GATGAACGCTGAGCAGAAAGCCCTGTTGATCAGCAACATCGCCGGTACCATGGTGGGTGTCAGCGAGGACGTGATTCAGC
GTCAGTTGCAGTACTTCTTCAAGGCCGATCCGGCCTATGGCGAAGGGATTGCCAAGGCGTTGGGCGTCCATCTCGCCTAA

Protein sequence :
MSKILTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITGYTSAKLFEQ
IGKQTETFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQMM
WDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAKGERTWVKWHFKTQQGIKNLAPAEAARLAGTDPDYAQ
RDLFEAIERGDYPRWTVCIQVMSEAEAASRDENPFDVTKTWSQRDYPLIEVGVLELNRNPLNYFAEVEQAAFGPSNMVPG
VGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRCPVNSYQRDGSMATGSYGSAPNYEPNSHVDAPKQSPRHAEPAL
ALNGSADRYDHREDTDYFSHAGALFRLMNAEQKALLISNIAGTMVGVSEDVIQRQLQYFFKADPAYGEGIAKALGVHLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 5e-145 63
katA YP_005126717.1 catalase Not tested Not named Protein 8e-108 50
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 1e-102 47
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 1e-102 47
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 1e-102 47
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 1e-102 47