Gene Information

Name : PputGB1_5098 (PputGB1_5098)
Accession : YP_001671318.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 5696221 - 5697627 bp
Length : 1407 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: pfl:PFL_0386 glutamine synthetase, type I

DNA sequence : 
ATGTCGAAGTCGGTTCAACTCATCAAAGATCATGACGTCAAGTGGATTGATCTGCGTTTCACGGACACCAAAGGCATTCA
GCACCACGTGACCATGCCGTCGCGTGATGCGCTGGACGAAGACTTCTTCGAAGTCGGCAAGATGTTCGACGGTTCCTCCA
TCGCTGGCTGGAAAGGCATCGAAGCCTCCGACATGATCCTGATGCCGGTCGACGACACTGCCGTCCTGGACCCGTTCACC
GAAGAGCCAACCCTGATCATCACCTGCGACATCGTCGACCCGTCGAGCATGCAGGGCTACGATCGCGACCCACGCGCCAT
CGCCAAGCGTGCCGAAGAGTACCTGAAGAGCACCGGCATCGGTGACACCGTCTTCGCCGGCCCAGAGCCTGAGTTCTTCA
TCTTCGACGAAGTGAAGTTCAAGTCGGACATTTCCGGCTCGATGTTCAAGATCTTCTCCGAGCAAGGCTCGTGGATGACC
GACGCTGACGTGGAAGGCGGCAACAAAGGCCACCGTCCAGGCGTGAAGGGCGGCTACTTCCCGGTTCCGCCGTTCGACCA
CGACCACGAAATCCGTACTGCCATGTGCAACGCACTGGAAGAAATGGGCCAGACCGTTGAAGTTCACCACCACGAAGTGG
CGACTGCCGGCCAGAACGAAATCGGCGTCAAGTTCAACACCCTGGTGAAAAAGGCTGACGAAGTACAGGCGCTGAAATAC
GTCGTGCACAACGTTGCCGACGCCTACGGCCGTACCGCCACCTTCATGCCTAAGCCTCTGTACGGCGACAACGGCTCGGG
CATGCACGTACACATGTCGATCTGGAAAGACGGCAAGAACACCTTCTCGGGTGAAGGCTATGCCGGCCTGTCCGACACCG
CCCTGTACTTCATCGGCGGTATCATCAAGCACGGTAAGGCCCTGAACGGCTTCACCAACCCGTCGACCAACTCCTACAAG
CGTCTGGTCCCAGGCTTCGAAGCCCCGGTAATGCTGGCCTACTCGGCTCGCAACCGTTCCGCCTCGATCCGTATTCCTTA
CGTCGGCAGCCCGAAAGCCCGCCGTATCGAAGCCCGCTTCCCGGACCCATCGGCCAACCCGTACCTGGCCTTCGCGGCCC
TGCTGATGGCTGGCCTGGATGGCATCCAGAACAAGATCCACCCAGGCGACGCGGCCGACAAGAACCTGTACGACCTGCCA
CCAGAAGAAGCCAAGAACATCCCGCAAGTGTGCGGCAGCCTGAAAGAGGCTCTGGAAGAGCTGGACAAAGGCCGCGCGTT
CCTGACCAAGGGCGGCGTGTTCTCCGACGACTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCC
GCACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGA

Protein sequence : 
MSKSVQLIKDHDVKWIDLRFTDTKGIQHHVTMPSRDALDEDFFEVGKMFDGSSIAGWKGIEASDMILMPVDDTAVLDPFT
EEPTLIITCDIVDPSSMQGYDRDPRAIAKRAEEYLKSTGIGDTVFAGPEPEFFIFDEVKFKSDISGSMFKIFSEQGSWMT
DADVEGGNKGHRPGVKGGYFPVPPFDHDHEIRTAMCNALEEMGQTVEVHHHEVATAGQNEIGVKFNTLVKKADEVQALKY
VVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSIWKDGKNTFSGEGYAGLSDTALYFIGGIIKHGKALNGFTNPSTNSYK
RLVPGFEAPVMLAYSARNRSASIRIPYVGSPKARRIEARFPDPSANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDLP
PEEAKNIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAFIELKSEEEIKVRTFVHPLEYELYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-105 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_5098 YP_001671318.1 glutamine synthetase, type I VFG1399 Protein 9e-106 51