Gene Information

Name : PputGB1_4930 (PputGB1_4930)
Accession : YP_001671150.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 5499782 - 5501179 bp
Length : 1398 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGAACGAGATCACCACCTCCGAACAGCTAGACCTGCAAACCGCAGCCCTGAAGGTACCGCCGCATTCCATCGAGGCCGA
ACAGGCCGTGCTCGGTGGCCTGATGCTGGACAACGATGCCTGGGAGCGGGTGCTGGACCAGGTGTCGGATGGTGACTTCT
ACCGGCATGACCACCGGCTGATCTTCCGCGCCGTGCACAAGTTGGTCGATGCCAACCAGCCATTCGACGTGGTGACCCTG
CACGAGCAGTTGGACAAGGAAGGCCTGTCCTCGCAGGTAGGAGGCCTGGCGTACCTGGCCGAGCTGGCCAAGAACACCCC
GTCGGTGGCCAACATCAAGGCCTACGCCGCGATCATTCGCGAACGGGCTACGCTGCGCCAGTTGATCAGTATCAGTACCG
ACATCGCCGACAACGCGTTCAACCCCCAGGGGCGCAACGCTGCAGAGATTCTCGACGATGCCGAGCGGCAAATCTTCCAG
ATTGCCGAGGCTCGGCCAAAAACCGGTGGCCCGGTAGGCGTCAACGAGCTGTTGACCATGGCCATCGACCGTATCGATAC
GCTGTTCAACTCCGACAGTGATATCACCGGTATCTCTACCGGGTACACCGACCTGGACGAAAAAACCAGCGGCCTGCAGG
CTGCCGACTTGATCATCGTCGCCGGCCGTCCGTCGATGGGTAAAACCACCTTTGCCATGAACCTGGTTGAGAACGCCGTC
CTACGCAGCGAAAAGGCGGTGCTGGTGTTCTCCCTCGAAATGCCAGGTGAATCGCTGATCATGCGTATGCTTTCCTCCCT
TGGCCGTATCGATCAGACCAAGGTTCGTTCCGGCCAGCTGGACGACGACGACTGGCCACGCCTGACCTCGGCAGTCAACC
TGCTCAACGACCGCAAGCTGTTCATCGACGATACCGCCGGCATCAGCCCGTCTGAAATGCGTGCGCGTACGCGGCGCTTG
GCGCGTGAGCACGGTGAAATCGGCATGATCATGGTCGACTACCTGCAGCTGATGCAGATCCCGGGCTCTTCCGGTGATAA
CCGCACCAACGAGATTTCCGAAATTTCCCGCTCGCTCAAGGCCCTGGCCAAGGAATTCAACTGCCCGGTCATCGCCCTGT
CGCAGCTGAACCGCTCCCTGGAACAGCGCCCGAACAAACGCCCGGTGAACTCCGACTTGCGTGAATCCGGTGCAATCGAG
CAGGACGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTACCACCCCGAGACCGAGCACAAGGGTGTGGCGGAAAT
CATCATCGGTAAACAGCGTAACGGCCCTATTGGCTTTGTGCGCCTGGCGTTTATCGGCAAGTACACCCGCTTCGAGAACC
TCGCACCGGGCATGTACAACTTCGACGACGACGAATGA

Protein sequence :
MNEITTSEQLDLQTAALKVPPHSIEAEQAVLGGLMLDNDAWERVLDQVSDGDFYRHDHRLIFRAVHKLVDANQPFDVVTL
HEQLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLISISTDIADNAFNPQGRNAAEILDDAERQIFQ
IAEARPKTGGPVGVNELLTMAIDRIDTLFNSDSDITGISTGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAV
LRSEKAVLVFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTRRL
AREHGEIGMIMVDYLQLMQIPGSSGDNRTNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIE
QDADVIMFVYRDEVYHPETEHKGVAEIIIGKQRNGPIGFVRLAFIGKYTRFENLAPGMYNFDDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-118 57
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 5e-106 55
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-104 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 5e-105 52
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-104 52
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-98 49
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-97 47
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-97 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-79 42