Gene Information

Name : PputGB1_4760 (PputGB1_4760)
Accession : YP_001670982.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 5323281 - 5324156 bp
Length : 876 bp
Strand : +
Note : KEGG: psa:PST_0849 predicted transcriptional regulator

DNA sequence : 
ATGAAACGCAAGCAATCCATCGAGCAGGTACGCTGGGACCTGGCACTTCGCTATCGTTTGATCGAAACCGTTGCCTGGTG
GGAAGGCCGGCTGACCACGGGCCACCTGATGCAGAGCTTTGGCATCAGCCGCCAGCAGGCGTCGAAGGACATCAATACCT
ACATCACCGAACATGCGCCCGAAAACTTGACGTATGACAAGCAGATCAAGGGCTATGTACCGAGCGAGCAGTTCGAGCCG
CTGTTCATCGATAACAGCGCCAGCGCCTATCTGCACCTGCTCTACCAGAACAACGAACGGGCGCCGCACATCGACGGGTT
GGCACTGGCCTACGCGCACACCCGTGTACTGGAGGTGCCTGACCGCCCCATTCGGCCAGAGGTGCTGCGCCCATTGCTCA
AGGCTTGCCGTGAAGGCCTGCGCCTGGAAACCGAATACGTGTCCTTCAACACCCCCAACGTCGAGGTGCGCCTGATCGCC
CCGCACACGCTGGTGTACACCGGCATGCGCTGGCACGTGCGGGCCTACTGCGAAAAGAACGGCCAATACCGCGACTTCGT
CCTCAGCCGCCTGCGTGGGCAGCCAGACTTGCTCGACGCGTCGCCGAACACGCGTGAGCAGGATGAAGACTGGAATGTCG
AGGTGCCGGTCATCTTCGCGCCTGATGGGCGGTTGAACACGGCGCAGCAGGCAATCATCGAAACCGACTTCGGCATGACC
GATGGCCAATTGGTGGTGCCTAGCCGCAGGGCATTGGTGAAGTATGTGTTGCAGCGGTATCAAATCGACCACCGCAACAT
GGCGATACTGCCCGAGGCCCAGCAACTGGTGGTGAGCAACCTCCAGGAACTGCAACCGTGGTTGATGAAGTACTGA

Protein sequence : 
MKRKQSIEQVRWDLALRYRLIETVAWWEGRLTTGHLMQSFGISRQQASKDINTYITEHAPENLTYDKQIKGYVPSEQFEP
LFIDNSASAYLHLLYQNNERAPHIDGLALAYAHTRVLEVPDRPIRPEVLRPLLKACREGLRLETEYVSFNTPNVEVRLIA
PHTLVYTGMRWHVRAYCEKNGQYRDFVLSRLRGQPDLLDASPNTREQDEDWNVEVPVIFAPDGRLNTAQQAIIETDFGMT
DGQLVVPSRRALVKYVLQRYQIDHRNMAILPEAQQLVVSNLQELQPWLMKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 5e-67 48
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 5e-67 48
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 6e-66 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_4760 YP_001670982.1 transcriptional regulator VFG1105 Protein 2e-67 48