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Name : PputGB1_4740 (PputGB1_4740) Accession : YP_001670962.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 5298977 - 5300233 bp Length : 1257 bp Strand : + Note : PFAM: integrase family protein; KEGG: pmy:Pmen_1188 phage integrase family protein DNA sequence : ATGTGCGCACAAGCTACCCGTCTCTCTGAACTCAAAGTCAAATCTGCCAAGCCTGCTGAAAAGGACTACGTCCTATTTGA TGGCGGCGGACTTCAAATGCGAGTGAGAAGCAATGGCTCTAAGCTATGGAACTTCAATTACCGACACCCTGTGACGAAGA AGCGGATCAACATGGGACTGGGAACCTTCCCCGAAGTCTCGTTGGCGCAAGCACGTAAGAGTTCCGTTGAAGCGAGGGAA GCACTTGCCCACGGCATAGACCCTAAAGAGAAACGGGATGCTGTGCTGCAAGCTAAACAAGCTGCGACTGAGCACACACT CCAGAATGTGGCGACGTCCTGGTATGAACTGAAGAAGGATGGTGTGACGCCGGCCTACGCTGAGGACATCTGGCGCTCGC TAACATTGCACATATTCCCGGACTTGGGCTCCACACCGATCTCAGCCATCCGCGCACCGCAAGTCATCAATCTGCTCCGA CCACTCGAAACCAAGGGTAGCCTTGAAACAGTGAAGCGACTGACGCAGCGGCTCAACGAGATCATGACCTACGGGGTCAA CTCGGGACTGATTCACGCGAACCCGCTCAGCGGTATCCGCTCCGTCTTCAAGAAACCGAAAAAGAAAAACATGGCGGCTC TACCCCCCGATGAGCTGAAAGAACTCATGGTGGCAATCGCCAATGCCAGCATAAAAAGAACAACCCGCTGCCTGATCGAG TGGCAGCTCCACACCATGACCCGGCCAGTCGAGGCAGCAACCACTCGCTGGGCAGATATCGACATCGAGAAGAAGATCTG GACGATCCCTGCGGAGCGCATGAAGAAACGCCGAACGCACATTGTCCCGCTCACGGAGCAGTCTCTCGCGCTCCTGGAAG CGATCAAGCCCTACAGTGGACATAGGGAGTATGTGTTCCCCGCAGACCGAAACCCTCGTACCCACTGCAACAGCCAAACC GCCAATATGGCACTGAAACGCATGGGTTTCGAAGGGCGCCTGGTAAGCCATGGGATGCGCTCTATGGCGAGCACCATCCT CAACGAGCACGGCTGGGATCCTGAATTGATCGAGGTTGCGCTTGCCCACGTCGATAAAGACGAGGTACGTAGCGCGTACA ATCGAGCAGATTACATAGAACGCAGACGCCCCATGATGGCGTGGTGGAGCGACCACATCCAGGAAGCTGCTACAGGCAAC CTGTCGGTGTCAGCCATAAGAGAAAATCAAGATAAAAAAGTCATCTCGATACGTTGA Protein sequence : MCAQATRLSELKVKSAKPAEKDYVLFDGGGLQMRVRSNGSKLWNFNYRHPVTKKRINMGLGTFPEVSLAQARKSSVEARE ALAHGIDPKEKRDAVLQAKQAATEHTLQNVATSWYELKKDGVTPAYAEDIWRSLTLHIFPDLGSTPISAIRAPQVINLLR PLETKGSLETVKRLTQRLNEIMTYGVNSGLIHANPLSGIRSVFKKPKKKNMAALPPDELKELMVAIANASIKRTTRCLIE WQLHTMTRPVEAATTRWADIDIEKKIWTIPAERMKKRRTHIVPLTEQSLALLEAIKPYSGHREYVFPADRNPRTHCNSQT ANMALKRMGFEGRLVSHGMRSMASTILNEHGWDPELIEVALAHVDKDEVRSAYNRADYIERRRPMMAWWSDHIQEAATGN LSVSAIRENQDKKVISIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 7e-138 | 63 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 9e-138 | 63 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 9e-138 | 63 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 7e-138 | 63 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 7e-138 | 63 |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 6e-113 | 54 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 8e-103 | 51 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 8e-103 | 51 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-103 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_4740 | YP_001670962.1 | integrase family protein | VFG1092 | Protein | 4e-103 | 51 |
